Gene
RNA
| Item | Value |
|---|---|
| gene id | G329641 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 20287010 ~ 20288218 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU373156 | True | 1097 | lncRNA | 0.39 | 2 | 20287010 | 20288218 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| msra | msra | coding | upstream | 128165 | 20055721 ~ 20158845 (+) |
| ift172 | ift172 | coding | upstream | 243173 | 20015451 ~ 20043837 (+) |
| trnaa-ugc-6 | NA | coding | upstream | 271739 | 20015200 ~ 20015271 (+) |
| ucn | urotensin-i | coding | upstream | 354016 | 19929307 ~ 19932994 (+) |
| LOC110522264 | mpv17 | coding | upstream | 361740 | 19895886 ~ 19925270 (+) |
| slc25a27 | slc25a27 | coding | downstream | 15502 | 20303720 ~ 20309419 (+) |
| LOC110522276 | ptrhd1 | coding | downstream | 38877 | 20327095 ~ 20328613 (+) |
| LOC110522280 | NA | coding | downstream | 131986 | 20420184 ~ 20423056 (+) |
| LOC118964445 | NA | coding | downstream | 139675 | 20427893 ~ 20431723 (+) |
| LOC110522277 | LOC106607858 | coding | downstream | 145556 | 20433774 ~ 20471815 (+) |
| G329632 | NA | non-coding | upstream | 22974 | 20263785 ~ 20264036 (+) |
| G329630 | NA | non-coding | upstream | 26899 | 20259896 ~ 20260111 (+) |
| G329629 | NA | non-coding | upstream | 28473 | 20256818 ~ 20258537 (+) |
| G329624 | NA | non-coding | upstream | 36136 | 20250552 ~ 20250874 (+) |
| G329613 | NA | non-coding | upstream | 49703 | 20236948 ~ 20237307 (+) |
| G329649 | LOC106607854 | non-coding | downstream | 21559 | 20309777 ~ 20311353 (+) |
| G329650 | LOC106607854 | non-coding | downstream | 23842 | 20312060 ~ 20317290 (+) |
| G330215 | NA | non-coding | downstream | 47006 | 20335224 ~ 20335624 (+) |
| G330216 | NA | non-coding | downstream | 47545 | 20335763 ~ 20335962 (+) |
| G329626 | NA | other | upstream | 33099 | 20252767 ~ 20253911 (+) |
| G329556 | NA | other | upstream | 186954 | 20097356 ~ 20100056 (+) |
| LOC110522251 | LOC106607828 | other | upstream | 1016485 | 19269334 ~ 19308960 (+) |
| LOC110522250 | LOC106607827 | other | upstream | 1018454 | 19258560 ~ 19268556 (+) |
| LOC110522244 | LOC106607820 | other | upstream | 1357933 | 18882852 ~ 18952184 (+) |
| G330771 | NA | other | downstream | 532450 | 20820668 ~ 20821157 (+) |
| LOC110522308 | LOC106607893 | other | downstream | 1395716 | 21683716 ~ 21701617 (+) |
| G332458 | LOC106584613 | other | downstream | 2210282 | 22498500 ~ 22498996 (+) |
| G332507 | NA | other | downstream | 2304712 | 22592930 ~ 22593362 (+) |
| G333079 | smyd2 | other | downstream | 2667661 | 22955879 ~ 22958196 (+) |
