G330267


Basic Information

Item Value
gene id G330267
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 20406683 ~ 20406941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU373916
ggtattgtgtgtaggccagtgacagaaAATCtaaatttcatccattttaaattcaggctgtaacaacaaaatgtggaaaaagtcaaggcgtgATGAATAGTTTCTAAAGGCGCCGCAGCATAAAATCACACTTAACCTTCACTCTGATTACAAAAGTACCAAGTCAAACTATCAGTGACGGTAATGATCTCATGCTCTGACACTTCTAGGTTTGTGGCTTATCCTGCTTCTCCACCACATCGCTCTCTGCGTCTTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373916 True 259 lncRNA 0.41 1 20406683 20406941

Neighbor

gene id symbol gene type direction distance location
LOC110522276 ptrhd1 coding upstream 78070 20327095 ~ 20328613 (+)
slc25a27 slc25a27 coding upstream 97264 20303720 ~ 20309419 (+)
msra msra coding upstream 247838 20055721 ~ 20158845 (+)
ift172 ift172 coding upstream 362846 20015451 ~ 20043837 (+)
trnaa-ugc-6 NA coding upstream 391412 20015200 ~ 20015271 (+)
LOC110522280 NA coding downstream 13263 20420184 ~ 20423056 (+)
LOC118964445 NA coding downstream 20952 20427893 ~ 20431723 (+)
LOC110522277 LOC106607858 coding downstream 26833 20433774 ~ 20471815 (+)
LOC110521055 enah coding downstream 86557 20493498 ~ 20651888 (+)
LOC110522282 LOC106607865 coding downstream 248024 20654965 ~ 20667264 (+)
G330261 NA non-coding upstream 9375 20396651 ~ 20397308 (+)
G330259 NA non-coding upstream 11383 20395099 ~ 20395300 (+)
G330221 NA non-coding upstream 66788 20339412 ~ 20339895 (+)
G330220 NA non-coding upstream 67574 20338822 ~ 20339109 (+)
G330219 NA non-coding upstream 68558 20337869 ~ 20338125 (+)
G330242 NA non-coding downstream 16330 20423271 ~ 20424553 (+)
G330241 NA non-coding downstream 18271 20425212 ~ 20427578 (+)
G330271 NA non-coding downstream 29656 20436597 ~ 20436864 (+)
G329626 NA other upstream 152772 20252767 ~ 20253911 (+)
G329556 NA other upstream 306627 20097356 ~ 20100056 (+)
LOC110522251 LOC106607828 other upstream 1136158 19269334 ~ 19308960 (+)
LOC110522250 LOC106607827 other upstream 1138127 19258560 ~ 19268556 (+)
LOC110522244 LOC106607820 other upstream 1477606 18882852 ~ 18952184 (+)
G330771 NA other downstream 413727 20820668 ~ 20821157 (+)
LOC110522308 LOC106607893 other downstream 1276993 21683716 ~ 21701617 (+)
G332458 LOC106584613 other downstream 2091559 22498500 ~ 22498996 (+)
G332507 NA other downstream 2185989 22592930 ~ 22593362 (+)
G333079 smyd2 other downstream 2548938 22955879 ~ 22958196 (+)

Expression


Co-expression Network