Gene
RNA
| Item | Value |
|---|---|
| gene id | G331280 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 21407772 ~ 21407985 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU375015 | True | 214 | lncRNA | 0.36 | 1 | 21407772 | 21407985 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521058 | tlr5 | coding | upstream | 12983 | 21371782 ~ 21394789 (+) |
| trnas-gcu-4 | NA | coding | upstream | 93807 | 21313884 ~ 21313965 (+) |
| LOC110521056 | LOC106607877 | coding | upstream | 105576 | 21290133 ~ 21302196 (+) |
| LOC110522291 | LOC106607878 | coding | upstream | 123918 | 21272273 ~ 21283854 (+) |
| LOC110522292 | LOC106607878 | coding | upstream | 135544 | 21256010 ~ 21272228 (+) |
| LOC110522302 | LOC106607888 | coding | downstream | 73341 | 21481326 ~ 21498082 (+) |
| LOC110522305 | LOC106607921 | coding | downstream | 107748 | 21515733 ~ 21520261 (+) |
| LOC110521060 | LOC106607633 | coding | downstream | 118089 | 21526074 ~ 21556088 (+) |
| LOC110522301 | adssl1 | coding | downstream | 148499 | 21556484 ~ 21569799 (+) |
| LOC110522300 | LOC106607890 | coding | downstream | 171759 | 21579744 ~ 21647839 (+) |
| G331279 | NA | non-coding | upstream | 82 | 21407457 ~ 21407690 (+) |
| G331277 | NA | non-coding | upstream | 1165 | 21405921 ~ 21406607 (+) |
| G331276 | NA | non-coding | upstream | 2152 | 21405002 ~ 21405620 (+) |
| G331266 | NA | non-coding | upstream | 16077 | 21391464 ~ 21391695 (+) |
| G331259 | NA | non-coding | upstream | 27611 | 21379885 ~ 21380161 (+) |
| G331285 | NA | non-coding | downstream | 11426 | 21419411 ~ 21419645 (+) |
| G331288 | NA | non-coding | downstream | 15423 | 21423408 ~ 21423612 (+) |
| G331320 | LOC106607886 | non-coding | downstream | 65496 | 21473481 ~ 21477379 (+) |
| G331913 | NA | non-coding | downstream | 349133 | 21757118 ~ 21757385 (+) |
| G330771 | NA | other | upstream | 586615 | 20820668 ~ 20821157 (+) |
| G329626 | NA | other | upstream | 1153861 | 20252767 ~ 20253911 (+) |
| G329556 | NA | other | upstream | 1307716 | 20097356 ~ 20100056 (+) |
| LOC110522251 | LOC106607828 | other | upstream | 2137247 | 19269334 ~ 19308960 (+) |
| LOC110522250 | LOC106607827 | other | upstream | 2139216 | 19258560 ~ 19268556 (+) |
| LOC110522308 | LOC106607893 | other | downstream | 275949 | 21683716 ~ 21701617 (+) |
| G332458 | LOC106584613 | other | downstream | 1090515 | 22498500 ~ 22498996 (+) |
| G332507 | NA | other | downstream | 1184945 | 22592930 ~ 22593362 (+) |
| G333079 | smyd2 | other | downstream | 1547894 | 22955879 ~ 22958196 (+) |
| ccdc167 | ccdc167 | other | downstream | 2337844 | 23745535 ~ 23748393 (+) |
