G331914


Basic Information

Item Value
gene id G331914
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 21757721 ~ 21758033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU375725
ggctacgtggtcccatggtgtatatacttgcgtactattgtttgtacagatgaacatggtacctttaggcgtttggaaattgctcccagaatggaccagacttgtggaggtctaaaaaaaaattctgaggtcttggctgattttttcttttgattttcccatgatgtcaagtaaagaggcactgagtttgaaggttggccatgaaatacatccacaggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacatcattttctggaattttccaagctggttAAGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU375725 True 313 lncRNA 0.41 1 21757721 21758033

Neighbor

gene id symbol gene type direction distance location
LOC110522310 LOC106607894 coding upstream 10616 21701928 ~ 21747105 (+)
LOC110522308 LOC106607893 coding upstream 56104 21683716 ~ 21701617 (+)
LOC110522307 LOC106607891 coding upstream 75524 21649885 ~ 21682197 (+)
LOC110522300 LOC106607890 coding upstream 109882 21579744 ~ 21647839 (+)
LOC110522301 adssl1 coding upstream 187922 21556484 ~ 21569799 (+)
mrps18a LOC106607900 coding downstream 331958 22089991 ~ 22099593 (+)
pou3f2a LOC106571484 coding downstream 423914 22181947 ~ 22185746 (+)
LOC110522322 LOC106607944 coding downstream 461387 22219420 ~ 22262486 (+)
LOC110522327 LOC106607943 coding downstream 548925 22306958 ~ 22312299 (+)
LOC110522328 elovl4 coding downstream 662565 22420598 ~ 22432975 (+)
G331913 NA non-coding upstream 336 21757118 ~ 21757385 (+)
G331320 LOC106607886 non-coding upstream 280342 21473481 ~ 21477379 (+)
G331288 NA non-coding upstream 334109 21423408 ~ 21423612 (+)
G331285 NA non-coding upstream 338076 21419411 ~ 21419645 (+)
G331921 NA non-coding downstream 6096 21764129 ~ 21780103 (+)
G331930 NA non-coding downstream 35762 21793795 ~ 21796979 (+)
G331992 NA non-coding downstream 83439 21841472 ~ 21841674 (+)
G331993 NA non-coding downstream 83754 21841787 ~ 21841993 (+)
G332010 NA non-coding downstream 97114 21855147 ~ 21855402 (+)
G330771 NA other upstream 936564 20820668 ~ 20821157 (+)
G329626 NA other upstream 1503810 20252767 ~ 20253911 (+)
G329556 NA other upstream 1657665 20097356 ~ 20100056 (+)
LOC110522251 LOC106607828 other upstream 2487196 19269334 ~ 19308960 (+)
G332458 LOC106584613 other downstream 740467 22498500 ~ 22498996 (+)
G332507 NA other downstream 834897 22592930 ~ 22593362 (+)
G333079 smyd2 other downstream 1197846 22955879 ~ 22958196 (+)
ccdc167 ccdc167 other downstream 1987796 23745535 ~ 23748393 (+)
G334116 NA other downstream 2075788 23833821 ~ 23837875 (+)

Expression


Co-expression Network