G332235


Basic Information

Item Value
gene id G332235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 22061955 ~ 22062173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU376111
TCCCAGaacattgtgggaaggttgtaagCAAAATAAGAAttggacaaccacgctctcaccaagcacTAAGAAACaaatggttctcagaacattatgtgctagctgggcatTCAGTACAACCTGTGTTTCTTTGACATTTCCCGTCCTGATGCTTAGATGGGAGATCACACTGTTAAGTAGGGGTTCTGTGTTGAGTAGACACATGTGAGGACTGAAGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376111 True 219 lncRNA 0.44 1 22061955 22062173

Neighbor

gene id symbol gene type direction distance location
LOC110522310 LOC106607894 coding upstream 314850 21701928 ~ 21747105 (+)
LOC110522308 LOC106607893 coding upstream 360338 21683716 ~ 21701617 (+)
LOC110522307 LOC106607891 coding upstream 379758 21649885 ~ 21682197 (+)
LOC110522300 LOC106607890 coding upstream 414116 21579744 ~ 21647839 (+)
LOC110522301 adssl1 coding upstream 492156 21556484 ~ 21569799 (+)
mrps18a LOC106607900 coding downstream 27818 22089991 ~ 22099593 (+)
pou3f2a LOC106571484 coding downstream 119774 22181947 ~ 22185746 (+)
LOC110522322 LOC106607944 coding downstream 157247 22219420 ~ 22262486 (+)
LOC110522327 LOC106607943 coding downstream 244785 22306958 ~ 22312299 (+)
LOC110522328 elovl4 coding downstream 358425 22420598 ~ 22432975 (+)
G332155 NA non-coding upstream 56909 22002310 ~ 22005046 (+)
G332107 NA non-coding upstream 91582 21969890 ~ 21970373 (+)
G332065 NA non-coding upstream 138540 21922014 ~ 21923415 (+)
G332069 NA non-coding upstream 154614 21907031 ~ 21907341 (+)
G332055 NA non-coding upstream 162834 21898915 ~ 21899121 (+)
G332270 NA non-coding downstream 77045 22139218 ~ 22139456 (+)
G332272 NA non-coding downstream 82269 22144442 ~ 22144647 (+)
G332339 NA non-coding downstream 241110 22303283 ~ 22320447 (+)
G332393 NA non-coding downstream 336651 22398824 ~ 22399335 (+)
G332396 NA non-coding downstream 340647 22402820 ~ 22403030 (+)
G330771 NA other upstream 1240798 20820668 ~ 20821157 (+)
G329626 NA other upstream 1808044 20252767 ~ 20253911 (+)
G329556 NA other upstream 1961899 20097356 ~ 20100056 (+)
LOC110522251 LOC106607828 other upstream 2791430 19269334 ~ 19308960 (+)
G332458 LOC106584613 other downstream 436327 22498500 ~ 22498996 (+)
G332507 NA other downstream 530757 22592930 ~ 22593362 (+)
G333079 smyd2 other downstream 893706 22955879 ~ 22958196 (+)
ccdc167 ccdc167 other downstream 1683656 23745535 ~ 23748393 (+)
G334116 NA other downstream 1771648 23833821 ~ 23837875 (+)

Expression


Co-expression Network