G332433


Basic Information

Item Value
gene id G332433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 22465135 ~ 22465370 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU376330
aatatacattttcacaaagtttgctgcctcagtttgtatgatggcaatttgcatatactccataatgttatgaagagtgatcagatgaattgcaattaattgcaaagtccctctttgccatgcaaatgaactgaatccccccaaaaacatttccactgcatttcagccctgccacaaaaggaccagctgacatcatgtcagtgattctctcgttaacacaggtgtgagtgttgacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376330 True 236 lncRNA 0.40 1 22465135 22465370

Neighbor

gene id symbol gene type direction distance location
LOC118964450 NA coding upstream 3112 22455884 ~ 22462023 (+)
LOC110522329 LOC106607941 coding upstream 9368 22449866 ~ 22455767 (+)
LOC118964449 NA coding upstream 17469 22446889 ~ 22447725 (+)
LOC110522328 elovl4 coding upstream 32160 22420598 ~ 22432975 (+)
LOC110522327 LOC106607943 coding upstream 152836 22306958 ~ 22312299 (+)
LOC110522334 NA coding downstream 57677 22523047 ~ 22524580 (+)
trnae-cuc-3 NA coding downstream 116588 22581958 ~ 22582029 (+)
gata4 gata4 coding downstream 137788 22603158 ~ 22617811 (+)
fdft1 fdft1 coding downstream 172932 22638302 ~ 22651343 (+)
ctsbb LOC100135964 coding downstream 193820 22659190 ~ 22664054 (+)
G332431 NA non-coding upstream 16012 22448764 ~ 22449123 (+)
G332426 NA non-coding upstream 22635 22442276 ~ 22442500 (+)
G332421 NA non-coding upstream 28828 22436044 ~ 22436307 (+)
G332408 NA non-coding upstream 30213 22429311 ~ 22434922 (+)
G332446 NA non-coding downstream 14575 22479945 ~ 22480516 (+)
G332447 NA non-coding downstream 15357 22480727 ~ 22480976 (+)
G332453 NA non-coding downstream 26030 22491400 ~ 22492026 (+)
G332460 NA non-coding downstream 45150 22510520 ~ 22510782 (+)
G332462 NA non-coding downstream 46782 22512152 ~ 22512484 (+)
LOC110522308 LOC106607893 other upstream 763521 21683716 ~ 21701617 (+)
G330771 NA other upstream 1643978 20820668 ~ 20821157 (+)
G329626 NA other upstream 2211224 20252767 ~ 20253911 (+)
G329556 NA other upstream 2365079 20097356 ~ 20100056 (+)
LOC110522251 LOC106607828 other upstream 3194610 19269334 ~ 19308960 (+)
G332458 LOC106584613 other downstream 33130 22498500 ~ 22498996 (+)
G332507 NA other downstream 127560 22592930 ~ 22593362 (+)
G333079 smyd2 other downstream 490509 22955879 ~ 22958196 (+)
ccdc167 ccdc167 other downstream 1280459 23745535 ~ 23748393 (+)
G334116 NA other downstream 1368451 23833821 ~ 23837875 (+)

Expression


Co-expression Network