G332458 (LOC106584613)


Basic Information

Item Value
gene id G332458
gene name LOC106584613
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 22498500 ~ 22498996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU376355
gttcccttcatctgtgtttgtttccatggagtgcactttaccctcctttctcttgcttttcatgCAGACCCTTGCGAAGTGATTAGCTGTACCACAGGATTTGCATATTTTTCCATAGGCTGGGCAGTGTTCTTTTCCTCGTCCATGAGAAATGCCACAATATCGGCATGTATTGGGGTTGTCTACTGCAGAGTTGGCTGTAGTATTAGCATTAGCTGTGGCAAAGGGGAATTTCTTTACTGGCTGTCTGAATGTAGCATTTACATTGTCCGTATGTTGCCTTTCTAGCTCCATGGACCTCATCCGTATATCAGTAAGCTCTGCTGCACGGCATGTCTCCACTGCCAAGGCCAGCGTCAGGTCACGTTCTCTCAGCAAACGTCTGCGGGTGCCCTCATCCGTTATGCCAAGCACAATCGTATCTCTGATCAGTTCATCTCTTAAAGCACCAGTCACATGTAGCTGCCTTTTCCCTTAACCTAGTGACAAAGCTGTCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584613

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376355 True 497 TUCP 0.47 1 22498500 22498996

Neighbor

gene id symbol gene type direction distance location
LOC118964450 NA coding upstream 36477 22455884 ~ 22462023 (+)
LOC110522329 LOC106607941 coding upstream 42733 22449866 ~ 22455767 (+)
LOC118964449 NA coding upstream 50834 22446889 ~ 22447725 (+)
LOC110522328 elovl4 coding upstream 65525 22420598 ~ 22432975 (+)
LOC110522327 LOC106607943 coding upstream 186201 22306958 ~ 22312299 (+)
LOC110522334 NA coding downstream 24051 22523047 ~ 22524580 (+)
trnae-cuc-3 NA coding downstream 82962 22581958 ~ 22582029 (+)
gata4 gata4 coding downstream 104162 22603158 ~ 22617811 (+)
fdft1 fdft1 coding downstream 139306 22638302 ~ 22651343 (+)
ctsbb LOC100135964 coding downstream 160194 22659190 ~ 22664054 (+)
G332453 NA non-coding upstream 6474 22491400 ~ 22492026 (+)
G332447 NA non-coding upstream 17524 22480727 ~ 22480976 (+)
G332446 NA non-coding upstream 17984 22479945 ~ 22480516 (+)
G332433 NA non-coding upstream 33130 22465135 ~ 22465370 (+)
G332431 NA non-coding upstream 49377 22448764 ~ 22449123 (+)
G332460 NA non-coding downstream 11524 22510520 ~ 22510782 (+)
G332462 NA non-coding downstream 13156 22512152 ~ 22512484 (+)
G332464 NA non-coding downstream 15872 22514868 ~ 22515084 (+)
G332473 NA non-coding downstream 30693 22529689 ~ 22529938 (+)
LOC110522308 LOC106607893 other upstream 796886 21683716 ~ 21701617 (+)
G330771 NA other upstream 1677343 20820668 ~ 20821157 (+)
G329626 NA other upstream 2244589 20252767 ~ 20253911 (+)
G329556 NA other upstream 2398444 20097356 ~ 20100056 (+)
LOC110522251 LOC106607828 other upstream 3227975 19269334 ~ 19308960 (+)
G332507 NA other downstream 93934 22592930 ~ 22593362 (+)
G333079 smyd2 other downstream 456883 22955879 ~ 22958196 (+)
ccdc167 ccdc167 other downstream 1246833 23745535 ~ 23748393 (+)
G334116 NA other downstream 1334825 23833821 ~ 23837875 (+)
si:ch211-51e12.7 NA other downstream 1564835 24063831 ~ 24072963 (+)

Expression


Co-expression Network