Gene
RNA
| Item | Value |
|---|---|
| gene id | G333130 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 22938988 ~ 22939542 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU377098 | True | 337 | lncRNA | 0.42 | 4 | 22938988 | 22939542 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522347 | LOC106607950 | coding | upstream | 89554 | 22814283 ~ 22849434 (+) |
| LOC110522345 | LOC106607930 | coding | upstream | 232479 | 22696828 ~ 22706509 (+) |
| LOC110522344 | LOC106607931 | coding | upstream | 245645 | 22684894 ~ 22693343 (+) |
| LOC110522342 | LOC106607951 | coding | upstream | 256675 | 22674306 ~ 22682313 (+) |
| ctsbb | LOC100135964 | coding | upstream | 274934 | 22659190 ~ 22664054 (+) |
| LOC118964451 | NA | coding | downstream | 168306 | 23107820 ~ 23113334 (+) |
| snx9b | snx9 | coding | downstream | 384896 | 23324438 ~ 23357018 (+) |
| LOC100136772 | LOC100136772 | coding | downstream | 442650 | 23382192 ~ 23388570 (+) |
| LOC118964414 | NA | coding | downstream | 549480 | 23489022 ~ 23491763 (+) |
| parp1 | parp1 | coding | downstream | 555229 | 23494771 ~ 23506567 (+) |
| G333086 | NA | non-coding | upstream | 70093 | 22866214 ~ 22868895 (+) |
| G333031 | NA | non-coding | upstream | 149694 | 22789067 ~ 22789294 (+) |
| G333028 | NA | non-coding | upstream | 152286 | 22786501 ~ 22786702 (+) |
| G332594 | kcnk2 | non-coding | upstream | 171084 | 22767589 ~ 22767904 (+) |
| G332576 | NA | non-coding | upstream | 193959 | 22744803 ~ 22745029 (+) |
| G333133 | NA | non-coding | downstream | 6603 | 22946145 ~ 22946409 (+) |
| G333134 | NA | non-coding | downstream | 7108 | 22946650 ~ 22946893 (+) |
| LOC110522349 | ptpn14 | non-coding | downstream | 14242 | 22853423 ~ 22955428 (+) |
| G333174 | NA | non-coding | downstream | 124637 | 23064179 ~ 23070412 (+) |
| G333189 | NA | non-coding | downstream | 157491 | 23097033 ~ 23098054 (+) |
| G332507 | NA | other | upstream | 345626 | 22592930 ~ 22593362 (+) |
| G332458 | LOC106584613 | other | upstream | 439992 | 22498500 ~ 22498996 (+) |
| LOC110522308 | LOC106607893 | other | upstream | 1237374 | 21683716 ~ 21701617 (+) |
| G330771 | NA | other | upstream | 2117831 | 20820668 ~ 20821157 (+) |
| G329626 | NA | other | upstream | 2685077 | 20252767 ~ 20253911 (+) |
| G333079 | smyd2 | other | downstream | 16337 | 22955879 ~ 22958196 (+) |
| ccdc167 | ccdc167 | other | downstream | 806287 | 23745535 ~ 23748393 (+) |
| G334116 | NA | other | downstream | 894279 | 23833821 ~ 23837875 (+) |
| si:ch211-51e12.7 | NA | other | downstream | 1124289 | 24063831 ~ 24072963 (+) |
| G334475 | NA | other | downstream | 1478040 | 24417582 ~ 24418946 (+) |
