Gene
RNA
| Item | Value |
|---|---|
| gene id | G333399 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 23483828 ~ 23484067 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU377423 | True | 240 | lncRNA | 0.42 | 1 | 23483828 | 23484067 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136772 | LOC100136772 | coding | upstream | 95258 | 23382192 ~ 23388570 (+) |
| snx9b | snx9 | coding | upstream | 126810 | 23324438 ~ 23357018 (+) |
| LOC118964451 | NA | coding | upstream | 370755 | 23107820 ~ 23113334 (+) |
| LOC110522349 | ptpn14 | coding | upstream | 528400 | 22853423 ~ 22955428 (+) |
| LOC110522347 | LOC106607950 | coding | upstream | 634394 | 22814283 ~ 22849434 (+) |
| LOC118964414 | NA | coding | downstream | 4955 | 23489022 ~ 23491763 (+) |
| parp1 | parp1 | coding | downstream | 10704 | 23494771 ~ 23506567 (+) |
| lin9 | LOC106608031 | coding | downstream | 25005 | 23509072 ~ 23525525 (+) |
| LOC110522421 | LOC106608030 | coding | downstream | 45845 | 23529912 ~ 23538153 (+) |
| nhsl1b | nhsl1 | coding | downstream | 58382 | 23542449 ~ 23719666 (+) |
| G333398 | NA | non-coding | upstream | 124 | 23483468 ~ 23483704 (+) |
| G333348 | NA | non-coding | upstream | 79309 | 23400991 ~ 23404519 (+) |
| G333252 | NA | non-coding | upstream | 246400 | 23235319 ~ 23237428 (+) |
| G333221 | NA | non-coding | upstream | 301558 | 23182068 ~ 23182270 (+) |
| G333447 | NA | non-coding | downstream | 102151 | 23586218 ~ 23586493 (+) |
| G333452 | NA | non-coding | downstream | 112362 | 23596429 ~ 23596646 (+) |
| G333464 | NA | non-coding | downstream | 136029 | 23620096 ~ 23620517 (+) |
| G333466 | NA | non-coding | downstream | 143029 | 23627096 ~ 23627335 (+) |
| G333474 | NA | non-coding | downstream | 153212 | 23637279 ~ 23637627 (+) |
| G333079 | smyd2 | other | upstream | 525632 | 22955879 ~ 22958196 (+) |
| G332507 | NA | other | upstream | 890466 | 22592930 ~ 22593362 (+) |
| G332458 | LOC106584613 | other | upstream | 984832 | 22498500 ~ 22498996 (+) |
| LOC110522308 | LOC106607893 | other | upstream | 1782214 | 21683716 ~ 21701617 (+) |
| G330771 | NA | other | upstream | 2662671 | 20820668 ~ 20821157 (+) |
| ccdc167 | ccdc167 | other | downstream | 261762 | 23745535 ~ 23748393 (+) |
| G334116 | NA | other | downstream | 349754 | 23833821 ~ 23837875 (+) |
| si:ch211-51e12.7 | NA | other | downstream | 579764 | 24063831 ~ 24072963 (+) |
| G334475 | NA | other | downstream | 933515 | 24417582 ~ 24418946 (+) |
| G334473 | armt1 | other | downstream | 936047 | 24420114 ~ 24422731 (+) |
