G333447


Basic Information

Item Value
gene id G333447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 23586218 ~ 23586493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU377475
catcaccaacaaactatcatggtccaaacacaccaagacagttgaaaagatttgacatgggtcctcagatcctccaaaATGTatgcagctgcaccatcaagagcatcctgactggttgcatcactgcctggtaaggcaattgctcggcctctgaccgcaaggcactacagaaggtagtgcatatggcccagtacgtggggccatgcttcctgccatcaaggacctctataccaggcggggtcagaggaaggccctaaaaatggccaAAGATTCTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377475 True 276 lncRNA 0.51 1 23586218 23586493

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-7 NA coding upstream 35388 23550757 ~ 23550830 (+)
LOC110522421 LOC106608030 coding upstream 48065 23529912 ~ 23538153 (+)
lin9 LOC106608031 coding upstream 60693 23509072 ~ 23525525 (+)
parp1 parp1 coding upstream 79651 23494771 ~ 23506567 (+)
LOC118964414 NA coding upstream 94455 23489022 ~ 23491763 (+)
ccdc167 ccdc167 coding downstream 159042 23745535 ~ 23748393 (+)
LOC110522416 NA coding downstream 181996 23768487 ~ 23772991 (+)
si:ch211-225h24.2 tdrp coding downstream 192118 23778611 ~ 23801507 (+)
acp1 NA coding downstream 280247 23866740 ~ 23879587 (+)
LOC110522408 LOC106608020 coding downstream 438441 24024934 ~ 24034274 (+)
G333399 NA non-coding upstream 102151 23483828 ~ 23484067 (+)
G333398 NA non-coding upstream 102514 23483468 ~ 23483704 (+)
G333348 NA non-coding upstream 181699 23400991 ~ 23404519 (+)
snx9b snx9 non-coding upstream 229204 23324438 ~ 23357018 (+)
G333252 NA non-coding upstream 348790 23235319 ~ 23237428 (+)
G333452 NA non-coding downstream 9936 23596429 ~ 23596646 (+)
G333464 NA non-coding downstream 33603 23620096 ~ 23620517 (+)
G333466 NA non-coding downstream 40603 23627096 ~ 23627335 (+)
G333474 NA non-coding downstream 50786 23637279 ~ 23637627 (+)
G333475 NA non-coding downstream 51591 23638084 ~ 23638344 (+)
G333079 smyd2 other upstream 628022 22955879 ~ 22958196 (+)
G332507 NA other upstream 992856 22592930 ~ 22593362 (+)
G332458 LOC106584613 other upstream 1087222 22498500 ~ 22498996 (+)
LOC110522308 LOC106607893 other upstream 1884604 21683716 ~ 21701617 (+)
G330771 NA other upstream 2765061 20820668 ~ 20821157 (+)
G334116 NA other downstream 247328 23833821 ~ 23837875 (+)
si:ch211-51e12.7 NA other downstream 477338 24063831 ~ 24072963 (+)
G334475 NA other downstream 831089 24417582 ~ 24418946 (+)
G334473 armt1 other downstream 833621 24420114 ~ 24422731 (+)

Expression


Co-expression Network