G333479


Basic Information

Item Value
gene id G333479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 23644104 ~ 23644314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU377509
cctcctctaacccagacaatgctgggtcaattgtgcgctgccccatgggcTGCAACAGTGCCcagactcgaaccaggatctctagtggcacggCCAgcaactgcaatgcagtgccttagaccactgcgccactcgagaggccACACTTTTTTTTTATCATGAATACGATGTCTCACTGTTTGTtattggcatttcctgcctacgtttgccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377509 True 211 lncRNA 0.53 1 23644104 23644314

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-7 NA coding upstream 93274 23550757 ~ 23550830 (+)
LOC110522421 LOC106608030 coding upstream 105951 23529912 ~ 23538153 (+)
lin9 LOC106608031 coding upstream 118579 23509072 ~ 23525525 (+)
parp1 parp1 coding upstream 137537 23494771 ~ 23506567 (+)
LOC118964414 NA coding upstream 152341 23489022 ~ 23491763 (+)
ccdc167 ccdc167 coding downstream 101221 23745535 ~ 23748393 (+)
LOC110522416 NA coding downstream 124175 23768487 ~ 23772991 (+)
si:ch211-225h24.2 tdrp coding downstream 134297 23778611 ~ 23801507 (+)
acp1 NA coding downstream 222426 23866740 ~ 23879587 (+)
LOC110522408 LOC106608020 coding downstream 380620 24024934 ~ 24034274 (+)
G333477 NA non-coding upstream 1658 23642091 ~ 23642446 (+)
G333475 NA non-coding upstream 5760 23638084 ~ 23638344 (+)
G333474 NA non-coding upstream 6477 23637279 ~ 23637627 (+)
G333466 NA non-coding upstream 16769 23627096 ~ 23627335 (+)
G333464 NA non-coding upstream 23587 23620096 ~ 23620517 (+)
G333481 NA non-coding downstream 786 23645100 ~ 23645684 (+)
G333482 NA non-coding downstream 1845 23646159 ~ 23646451 (+)
G333484 NA non-coding downstream 4351 23648665 ~ 23648953 (+)
G333487 NA non-coding downstream 14418 23658732 ~ 23658946 (+)
G333504 NA non-coding downstream 34793 23679107 ~ 23679323 (+)
G333079 smyd2 other upstream 685908 22955879 ~ 22958196 (+)
G332507 NA other upstream 1050742 22592930 ~ 22593362 (+)
G332458 LOC106584613 other upstream 1145108 22498500 ~ 22498996 (+)
LOC110522308 LOC106607893 other upstream 1942490 21683716 ~ 21701617 (+)
G330771 NA other upstream 2822947 20820668 ~ 20821157 (+)
G334116 NA other downstream 189507 23833821 ~ 23837875 (+)
si:ch211-51e12.7 NA other downstream 419517 24063831 ~ 24072963 (+)
G334475 NA other downstream 773268 24417582 ~ 24418946 (+)
G334473 armt1 other downstream 775800 24420114 ~ 24422731 (+)

Expression


Co-expression Network