G333487


Basic Information

Item Value
gene id G333487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 23658732 ~ 23658946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU377517
tattattattttgacgatcgttttatacctttatttaactaggcaagtcagttaagaacgggcctcccgggtggcacagtggttaagggcgctgtactgcagccccagctgtgccaccagagactctggattcgcgcccaggctctgtcataaccggccgcgaccgggaggtctgtggggcgacgcacaattggcctaacgtcgtccgggttagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377517 True 215 lncRNA 0.55 1 23658732 23658946

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-7 NA coding upstream 107902 23550757 ~ 23550830 (+)
LOC110522421 LOC106608030 coding upstream 120579 23529912 ~ 23538153 (+)
lin9 LOC106608031 coding upstream 133207 23509072 ~ 23525525 (+)
parp1 parp1 coding upstream 152165 23494771 ~ 23506567 (+)
LOC118964414 NA coding upstream 166969 23489022 ~ 23491763 (+)
ccdc167 ccdc167 coding downstream 86589 23745535 ~ 23748393 (+)
LOC110522416 NA coding downstream 109543 23768487 ~ 23772991 (+)
si:ch211-225h24.2 tdrp coding downstream 119665 23778611 ~ 23801507 (+)
acp1 NA coding downstream 207794 23866740 ~ 23879587 (+)
LOC110522408 LOC106608020 coding downstream 365988 24024934 ~ 24034274 (+)
G333484 NA non-coding upstream 9779 23648665 ~ 23648953 (+)
G333482 NA non-coding upstream 12281 23646159 ~ 23646451 (+)
G333481 NA non-coding upstream 13048 23645100 ~ 23645684 (+)
G333479 NA non-coding upstream 14418 23644104 ~ 23644314 (+)
G333477 NA non-coding upstream 16286 23642091 ~ 23642446 (+)
G333504 NA non-coding downstream 20161 23679107 ~ 23679323 (+)
G333506 NA non-coding downstream 21265 23680211 ~ 23680469 (+)
G333507 NA non-coding downstream 22407 23681353 ~ 23681552 (+)
G333508 NA non-coding downstream 25609 23684555 ~ 23684865 (+)
G333528 kif25 non-coding downstream 76147 23735093 ~ 23738140 (+)
G333079 smyd2 other upstream 700536 22955879 ~ 22958196 (+)
G332507 NA other upstream 1065370 22592930 ~ 22593362 (+)
G332458 LOC106584613 other upstream 1159736 22498500 ~ 22498996 (+)
LOC110522308 LOC106607893 other upstream 1957118 21683716 ~ 21701617 (+)
G330771 NA other upstream 2837575 20820668 ~ 20821157 (+)
G334116 NA other downstream 174875 23833821 ~ 23837875 (+)
si:ch211-51e12.7 NA other downstream 404885 24063831 ~ 24072963 (+)
G334475 NA other downstream 758636 24417582 ~ 24418946 (+)
G334473 armt1 other downstream 761168 24420114 ~ 24422731 (+)

Expression


Co-expression Network