Gene
RNA
| Item | Value |
|---|---|
| gene id | G334078 |
| gene name | fbxo25 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 23808854 ~ 23809760 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| fbxo25 | Predicted to be involved in protein ubiquitination. Predicted to be part of SCF ubiquitin ligase complex. Predicted to be active in cytoplasm and nucleus. Is expressed in epiphysis; gut; hindbrain; olfactory placode; and peripheral olfactory organ. Orthologous to human FBXO25 (F-box protein 25). |
| description |
|---|
| F-box only protein 25 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU378148 | True | 641 | lncRNA | 0.48 | 2 | 23808854 | 23809760 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-225h24.2 | tdrp | coding | upstream | 7347 | 23778611 ~ 23801507 (+) |
| LOC110522416 | NA | coding | upstream | 37850 | 23768487 ~ 23772991 (+) |
| ccdc167 | ccdc167 | coding | upstream | 60461 | 23745535 ~ 23748393 (+) |
| nhsl1b | nhsl1 | coding | upstream | 89188 | 23542449 ~ 23719666 (+) |
| trnaa-ugc-7 | NA | coding | upstream | 258024 | 23550757 ~ 23550830 (+) |
| acp1 | NA | coding | downstream | 56980 | 23866740 ~ 23879587 (+) |
| LOC110522408 | LOC106608020 | coding | downstream | 215174 | 24024934 ~ 24034274 (+) |
| LOC110522407 | gen1 | coding | downstream | 242788 | 24052548 ~ 24060425 (+) |
| msgn1 | LOC106608038 | coding | downstream | 251917 | 24061677 ~ 24063116 (+) |
| si:ch211-51e12.7 | NA | coding | downstream | 254071 | 24063831 ~ 24072963 (+) |
| G333528 | kif25 | non-coding | upstream | 70714 | 23735093 ~ 23738140 (+) |
| G333508 | NA | non-coding | upstream | 123989 | 23684555 ~ 23684865 (+) |
| G333507 | NA | non-coding | upstream | 127302 | 23681353 ~ 23681552 (+) |
| G333506 | NA | non-coding | upstream | 128385 | 23680211 ~ 23680469 (+) |
| G334105 | NA | non-coding | downstream | 10821 | 23820581 ~ 23820857 (+) |
| G334110 | NA | non-coding | downstream | 15542 | 23825302 ~ 23825540 (+) |
| G334116 | NA | non-coding | downstream | 25877 | 23833821 ~ 23837875 (+) |
| G334132 | NA | non-coding | downstream | 47795 | 23857555 ~ 23857813 (+) |
| G334133 | NA | non-coding | downstream | 49308 | 23859068 ~ 23859361 (+) |
| G333079 | smyd2 | other | upstream | 850658 | 22955879 ~ 22958196 (+) |
| G332507 | NA | other | upstream | 1215492 | 22592930 ~ 22593362 (+) |
| G332458 | LOC106584613 | other | upstream | 1309858 | 22498500 ~ 22498996 (+) |
| LOC110522308 | LOC106607893 | other | upstream | 2107240 | 21683716 ~ 21701617 (+) |
| G334475 | NA | other | downstream | 607822 | 24417582 ~ 24418946 (+) |
| G334473 | armt1 | other | downstream | 610354 | 24420114 ~ 24422731 (+) |
| LOC110522376 | sash1 | other | downstream | 2241293 | 25761890 ~ 26057813 (+) |
