Gene
RNA
| Item | Value |
|---|---|
| gene id | G334313 |
| gene name | cssa06h1orf115 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 24018489 ~ 24024491 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein C1orf115 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU378419 | True | 1542 | lncRNA | 0.40 | 2 | 24018489 | 24024491 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| acp1 | NA | coding | upstream | 138902 | 23866740 ~ 23879587 (+) |
| si:ch211-225h24.2 | tdrp | coding | upstream | 216982 | 23778611 ~ 23801507 (+) |
| LOC110522416 | NA | coding | upstream | 247485 | 23768487 ~ 23772991 (+) |
| ccdc167 | ccdc167 | coding | upstream | 270096 | 23745535 ~ 23748393 (+) |
| trnaa-ugc-7 | NA | coding | upstream | 467659 | 23550757 ~ 23550830 (+) |
| LOC110522408 | LOC106608020 | coding | downstream | 443 | 24024934 ~ 24034274 (+) |
| LOC110522407 | gen1 | coding | downstream | 28057 | 24052548 ~ 24060425 (+) |
| msgn1 | LOC106608038 | coding | downstream | 37186 | 24061677 ~ 24063116 (+) |
| si:ch211-51e12.7 | NA | coding | downstream | 39340 | 24063831 ~ 24072963 (+) |
| tulp4a | tulp4 | coding | downstream | 58364 | 24082855 ~ 24138549 (+) |
| G334312 | NA | non-coding | upstream | 1285 | 24016737 ~ 24017204 (+) |
| G334311 | NA | non-coding | upstream | 4604 | 24013668 ~ 24013885 (+) |
| G334162 | NA | non-coding | upstream | 87233 | 23930888 ~ 23931256 (+) |
| G334133 | NA | non-coding | upstream | 159128 | 23859068 ~ 23859361 (+) |
| G334132 | NA | non-coding | upstream | 160676 | 23857555 ~ 23857813 (+) |
| G334325 | NA | non-coding | downstream | 27220 | 24051711 ~ 24052073 (+) |
| G334369 | serac1 | non-coding | downstream | 131230 | 24155721 ~ 24159410 (+) |
| G334375 | NA | non-coding | downstream | 141960 | 24166451 ~ 24183626 (+) |
| G334116 | NA | other | upstream | 184067 | 23833821 ~ 23837875 (+) |
| G333079 | smyd2 | other | upstream | 1060293 | 22955879 ~ 22958196 (+) |
| G332507 | NA | other | upstream | 1425127 | 22592930 ~ 22593362 (+) |
| G332458 | LOC106584613 | other | upstream | 1519493 | 22498500 ~ 22498996 (+) |
| G334475 | NA | other | downstream | 393091 | 24417582 ~ 24418946 (+) |
| G334473 | armt1 | other | downstream | 395623 | 24420114 ~ 24422731 (+) |
| LOC110522376 | sash1 | other | downstream | 2026562 | 25761890 ~ 26057813 (+) |
| G336464 | NA | other | downstream | 2868644 | 26892229 ~ 26894837 (+) |
