G334768



Basic Information


Item Value
gene id G334768
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 25030474 ~ 25030760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU378935
GTACAGGGTTATGTAGCATCAAACAGATGTTAGCCATTCAGAGATATCCAAATTATGCGTATTTGTCAAACTAAAATACGGAGTCTACAATATTTAATGCTAACTGAAAAATAACTGGGTACTCAACAAGGATGTTATATGGTAaaagtaacatactgtattttttGTATGAACTGTGCAGTACAGTTCAGTGCGTCTCAGGTGTAGTAAAGTGCAGAGAACTGTAGCTACAGATTGTTACAAAAGATAATGTGATTCAACCTAAGATTTTTAGTATCCATTAATTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU378935 True 287 lncRNA 0.33 1 25030474 25030760

Neighbor


gene id symbol gene type direction distance location
utrn LOC106608002 coding upstream 41337 24648025 ~ 24989137 (+)
trnal-uaa NA coding upstream 385168 24645224 ~ 24645306 (+)
zbtb2b zbtb2 coding upstream 587029 24434135 ~ 24443445 (+)
syne1a syne1 coding upstream 633808 24183965 ~ 24396666 (+)
tmem181 tmem181 coding upstream 882137 24138959 ~ 24148337 (+)
LOC118964455 NA coding downstream 72034 25102794 ~ 25104074 (+)
LOC110522385 LOC106607999 coding downstream 75428 25106188 ~ 25127317 (+)
LOC110521065 LOC106607993 coding downstream 96863 25127623 ~ 25135539 (+)
LOC110522384 LOC106607998 coding downstream 109592 25140352 ~ 25155796 (+)
LOC110522380 LOC106607995 coding downstream 136231 25166991 ~ 25209400 (+)
G334750 NA non-coding upstream 24549 25005327 ~ 25005925 (+)
G334749 NA non-coding upstream 25801 25003275 ~ 25004673 (+)
G334746 NA non-coding upstream 29330 25000920 ~ 25001144 (+)
G334745 NA non-coding upstream 29949 25000197 ~ 25000525 (+)
G334744 NA non-coding upstream 31408 24998836 ~ 24999066 (+)
G335430 NA non-coding downstream 19693 25050453 ~ 25050709 (+)
G335431 NA non-coding downstream 20560 25051320 ~ 25051618 (+)
G335433 NA non-coding downstream 29001 25059761 ~ 25060055 (+)
G335443 NA non-coding downstream 41192 25071952 ~ 25119082 (+)
G334473 armt1 other upstream 607743 24420114 ~ 24422731 (+)
G334475 NA other upstream 611528 24417582 ~ 24418946 (+)
si:ch211-51e12.7 NA other upstream 960798 24063831 ~ 24072963 (+)
G334116 NA other upstream 1196052 23833821 ~ 23837875 (+)
ccdc167 ccdc167 other upstream 1282203 23745535 ~ 23748393 (+)
LOC110522376 sash1 other downstream 1020293 25761890 ~ 26057813 (+)
G336464 NA other downstream 1862375 26892229 ~ 26894837 (+)
LOC110522355 plekhg1 other downstream 2145621 27054628 ~ 27185449 (+)
LOC118964415 LOC106608050 other downstream 2560092 27537262 ~ 27601564 (+)
G339660 NA other downstream 3827956 28858716 ~ 28859155 (+)

Expression


G334768 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G334768 Expression in each Bioproject

Bar chart with 4 bars.
G334768 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
End of interactive chart.

Co-expression Network