G337161



Basic Information


Item Value
gene id G337161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 25533881 ~ 25534162 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU381688
gaaatatattcactcacaagcctagccttttgttaacaacactgtcatctcagattttcaaaatatgcttttcaaccatagctacacaagcatttgtgtaagagtattgatagcctagcatagcattaagcctagcattcagcaggcaacattttcgctaaaacaagaaaagcattcaaataaaatcatttacctttgaagaacttcggatgttttcaatgaggagactctcagttagatagcaaatgtaaattttttcccaaaatatgatttgtgtaggag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU381688 True 282 lncRNA 0.34 1 25533881 25534162
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110522383 LOC106607997 coding downstream 393444 25135585 ~ 25140437 (-)
epm2a epm2a coding downstream 428326 25085911 ~ 25105555 (-)
LOC118964454 NA coding downstream 473171 25028611 ~ 25060710 (-)
LOC110522390 NA coding downstream 889517 24639723 ~ 24644364 (-)
LOC110522391 LOC106608006 coding downstream 904615 24624615 ~ 24629266 (-)
LOC110522375 LOC106607984 coding upstream 652244 26186406 ~ 26211003 (-)
cdc40 cdc40 coding upstream 748446 26282608 ~ 26327662 (-)
LOC110522371 gpr6 coding upstream 948426 26482588 ~ 26484715 (-)
fig4a fig4 coding upstream 964352 26498514 ~ 26603349 (-)
cep57l1 cep57l1 coding upstream 1146495 26680657 ~ 26685611 (-)
G337157 yo84 non-coding downstream 3034 25530490 ~ 25530847 (-)
G337093 NA non-coding downstream 102566 25430919 ~ 25431315 (-)
G336977 NA non-coding downstream 274548 25259126 ~ 25259333 (-)
G336939 LOC106607995 non-coding downstream 335651 25196125 ~ 25198230 (-)
G335434 NA non-coding downstream 473832 25058439 ~ 25060049 (-)
G337165 NA non-coding upstream 4871 25539033 ~ 25539324 (-)
G337188 NA non-coding upstream 64613 25598775 ~ 25601072 (-)
G337189 NA non-coding upstream 67748 25601910 ~ 25602222 (-)
G337191 NA non-coding upstream 73480 25607642 ~ 25607882 (-)
G337205 NA non-coding upstream 97577 25631739 ~ 25631962 (-)
G337147 LOC106607991 other downstream 21101 25510510 ~ 25512780 (-)
G334789 NA other downstream 1509378 24018472 ~ 24024503 (-)
G334252 NA other downstream 1594512 23938272 ~ 23939369 (-)
G333842 LOC100136772 other downstream 2145311 23387061 ~ 23388570 (-)
LOC110522343 LOC106607932 other downstream 2869974 22659885 ~ 22674233 (-)
G337207 NA other upstream 99555 25633717 ~ 25634063 (-)
G337894 NA other upstream 1233212 26767374 ~ 26770165 (-)
LOC110522434 fkbp1b other upstream 2196246 27730407 ~ 27757242 (-)
G339008 NA other upstream 2388287 27922449 ~ 27923104 (-)
G340468 NA other upstream 3322667 28856829 ~ 28857186 (-)

Expression


G337161 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G337161 Expression in each Bioproject

Bar chart with 15 bars.
G337161 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network