G336006


Basic Information

Item Value
gene id G336006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 26078125 ~ 26080957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU380339
tctgtagatgaggtgctgtttttaCTTGGCTAAAGGCTGCACTAGTATCATTCCctctgtagatgaggtgctgtttttaCTGGGCTAAAGGCTACACTAGTATCATTCCCTCTGTAGTTGAGATGCTGTTTTTACTGGGCTAAAGGCTGCACTAGTACCATTCCctctgtagatgagGTGCTGTTTTTACTGGGCTAAAGGCTGCACTAGTATCATTCCctctgtagatgaggtgctgtttttaCTGGGCTAAAGGCTACACTAGTATCATTCCctctgtagatgaggtgctgtttttaCTGGGCTAAAGGCTGCACTAGTATCATTCCctctgtagatgaggtgctgtttttaCTGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU380339 True 360 lncRNA 0.45 2 26078125 26080957

Neighbor

gene id symbol gene type direction distance location
LOC110522376 sash1 coding upstream 20312 25761890 ~ 26057813 (+)
LOC118964400 NA coding upstream 280970 25773001 ~ 25797155 (+)
LOC110522379 LOC106607987 coding upstream 478244 25580399 ~ 25599881 (+)
LOC110522378 LOC106607989 coding upstream 499294 25556661 ~ 25578831 (+)
LOC118964457 LOC106607989 coding upstream 529019 25546661 ~ 25549112 (+)
LOC110522374 mettl24 coding downstream 135444 26216401 ~ 26280564 (+)
LOC110522372 wasf1 coding downstream 246594 26327551 ~ 26465676 (+)
ak9 ak9 coding downstream 522439 26603396 ~ 26624669 (+)
ppil6 ppil6 coding downstream 543955 26624912 ~ 26642218 (+)
LOC110522366 cd164 coding downstream 570546 26651503 ~ 26667757 (+)
G335981 NA non-coding upstream 62664 26015199 ~ 26015461 (+)
G335857 NA non-coding upstream 269599 25808116 ~ 25808526 (+)
G335789 NA non-coding upstream 371130 25706784 ~ 25706995 (+)
G335782 NA non-coding upstream 384014 25693891 ~ 25694111 (+)
G335778 NA non-coding upstream 392391 25685518 ~ 25685734 (+)
G336010 NA non-coding downstream 2501 26083458 ~ 26083866 (+)
G336055 NA non-coding downstream 68714 26149671 ~ 26150065 (+)
G336062 NA non-coding downstream 80723 26161680 ~ 26164194 (+)
G336098 NA non-coding downstream 188498 26269455 ~ 26282016 (+)
G336154 NA non-coding downstream 258980 26339937 ~ 26431304 (+)
G334473 armt1 other upstream 1655394 24420114 ~ 24422731 (+)
G334475 NA other upstream 1659179 24417582 ~ 24418946 (+)
si:ch211-51e12.7 NA other upstream 2008449 24063831 ~ 24072963 (+)
G334116 NA other upstream 2243703 23833821 ~ 23837875 (+)
G336464 NA other downstream 812178 26892229 ~ 26894837 (+)
LOC110522355 plekhg1 other downstream 1095424 27054628 ~ 27185449 (+)
LOC118964415 LOC106608050 other downstream 1509895 27537262 ~ 27601564 (+)
G339660 NA other downstream 2777759 28858716 ~ 28859155 (+)
G339693 NA other downstream 2833642 28914599 ~ 28915539 (+)

Expression


Co-expression Network