G336055


Basic Information

Item Value
gene id G336055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 26149671 ~ 26150065 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU380406
ggtttgtccaaactgttgactggtactgtagtgaCTATGATTGGGCCAAATATAGGCCGGTACTGACCGAACGTCTTGAGGACGTTGAAATAAAGGCCGGTCCAGACCGAACTAAATCTGAACCAAAAATAGACGTCGATGATTGGTTCAGGTCTGGTCTGGACCCAACCAAAAATCtgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU380406 True 265 lncRNA 0.42 2 26149671 26150065

Neighbor

gene id symbol gene type direction distance location
LOC110522376 sash1 coding upstream 91858 25761890 ~ 26057813 (+)
LOC118964400 NA coding upstream 352516 25773001 ~ 25797155 (+)
LOC110522379 LOC106607987 coding upstream 549790 25580399 ~ 25599881 (+)
LOC110522378 LOC106607989 coding upstream 570840 25556661 ~ 25578831 (+)
LOC118964457 LOC106607989 coding upstream 600565 25546661 ~ 25549112 (+)
LOC110522374 mettl24 coding downstream 66336 26216401 ~ 26280564 (+)
LOC110522372 wasf1 coding downstream 177486 26327551 ~ 26465676 (+)
ak9 ak9 coding downstream 453331 26603396 ~ 26624669 (+)
ppil6 ppil6 coding downstream 474847 26624912 ~ 26642218 (+)
LOC110522366 cd164 coding downstream 501438 26651503 ~ 26667757 (+)
G336010 NA non-coding upstream 65805 26083458 ~ 26083866 (+)
G336006 NA non-coding upstream 68714 26078125 ~ 26080957 (+)
G335981 NA non-coding upstream 134210 26015199 ~ 26015461 (+)
G335857 NA non-coding upstream 341145 25808116 ~ 25808526 (+)
G335789 NA non-coding upstream 442676 25706784 ~ 25706995 (+)
G336062 NA non-coding downstream 11615 26161680 ~ 26164194 (+)
G336098 NA non-coding downstream 119390 26269455 ~ 26282016 (+)
G336154 NA non-coding downstream 189872 26339937 ~ 26431304 (+)
G336221 NA non-coding downstream 339643 26489708 ~ 26490154 (+)
G336234 NA non-coding downstream 353232 26503297 ~ 26503561 (+)
G334473 armt1 other upstream 1726940 24420114 ~ 24422731 (+)
G334475 NA other upstream 1730725 24417582 ~ 24418946 (+)
si:ch211-51e12.7 NA other upstream 2079995 24063831 ~ 24072963 (+)
G334116 NA other upstream 2315249 23833821 ~ 23837875 (+)
G336464 NA other downstream 743070 26892229 ~ 26894837 (+)
LOC110522355 plekhg1 other downstream 1026316 27054628 ~ 27185449 (+)
LOC118964415 LOC106608050 other downstream 1440787 27537262 ~ 27601564 (+)
G339660 NA other downstream 2708651 28858716 ~ 28859155 (+)
G339693 NA other downstream 2764534 28914599 ~ 28915539 (+)

Expression


Co-expression Network