G336244


Basic Information

Item Value
gene id G336244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 26513951 ~ 26514547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU380640
ttttttgtgcaaagcaatgatgacggcacgtgtttccttgcaggtaaccatggttgacagaggaagaacaatgattccaagcaccaccctccttttgaagcttccagtctgttattcgaactcaatcagcatgacagagtgatctccagtcttgtcctcgtcaacactcacacctgtgttaacgagagaatcaactggtccttttgtggcagggctgaaatgcagtggaaatgtttttggggatccagttcatttgcatggcaaagtgggactttgcaattGGCAAAATGGTTTTAATTGAAGGGTTTGGGTGTTatggttttattgtcacatatgccggataggtgcagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU380640 True 352 lncRNA 0.44 2 26513951 26514547

Neighbor

gene id symbol gene type direction distance location
LOC110522372 wasf1 coding upstream 48275 26327551 ~ 26465676 (+)
LOC110522374 mettl24 coding upstream 233387 26216401 ~ 26280564 (+)
LOC110522377 LOC106607986 coding upstream 336134 26059992 ~ 26177817 (+)
LOC110522376 sash1 coding upstream 456138 25761890 ~ 26057813 (+)
ak9 ak9 coding downstream 88849 26603396 ~ 26624669 (+)
ppil6 ppil6 coding downstream 110365 26624912 ~ 26642218 (+)
LOC110522366 cd164 coding downstream 136956 26651503 ~ 26667757 (+)
sesn1 sesn1 coding downstream 171595 26686142 ~ 26756544 (+)
snx3 snx3 coding downstream 421288 26935835 ~ 26961848 (+)
G336234 NA non-coding upstream 10390 26503297 ~ 26503561 (+)
G336221 NA non-coding upstream 23797 26489708 ~ 26490154 (+)
G336154 NA non-coding upstream 82647 26339937 ~ 26431304 (+)
G336098 NA non-coding upstream 231935 26269455 ~ 26282016 (+)
G336062 NA non-coding upstream 349757 26161680 ~ 26164194 (+)
G336295 NA non-coding downstream 82145 26596692 ~ 26631463 (+)
G336318 NA non-coding downstream 131968 26646515 ~ 26716267 (+)
G336382 NA non-coding downstream 222976 26737523 ~ 26739412 (+)
G336399 NA non-coding downstream 252871 26767418 ~ 26767994 (+)
G336429 NA non-coding downstream 313767 26828314 ~ 26828550 (+)
G334473 armt1 other upstream 2091220 24420114 ~ 24422731 (+)
G334475 NA other upstream 2095005 24417582 ~ 24418946 (+)
si:ch211-51e12.7 NA other upstream 2444275 24063831 ~ 24072963 (+)
G334116 NA other upstream 2679529 23833821 ~ 23837875 (+)
G336464 NA other downstream 378588 26892229 ~ 26894837 (+)
LOC110522355 plekhg1 other downstream 661834 27054628 ~ 27185449 (+)
LOC118964415 LOC106608050 other downstream 1076305 27537262 ~ 27601564 (+)
G339660 NA other downstream 2344169 28858716 ~ 28859155 (+)
G339693 NA other downstream 2400052 28914599 ~ 28915539 (+)

Expression


Co-expression Network