G336318


Basic Information

Item Value
gene id G336318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 26646515 ~ 26716267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU380731
caggaggggactgagcacgcacccgagGGGcacccatgttgaggatcagcatggcggatatGTTGCTAccaacccttaccacctggggctgcccgtcaggaagtccaggatccagttgcagagggaggtgtttagtcccaggatccttagcttagtgatgagctttgagggtactatggtgttgaaagctgagctgttgtcattgaatagcattctcatgtaggtgttccttttgtccaggtgggaaagtgcagtgtggagtgcaatagagtgcatcatctgtggatctgttggggcgaattggagtgggtctagggtttctgggataatggtgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU380731 True 336 lncRNA 0.52 2 26646515 26716267

Neighbor

gene id symbol gene type direction distance location
ppil6 ppil6 coding upstream 4297 26624912 ~ 26642218 (+)
ak9 ak9 coding upstream 21846 26603396 ~ 26624669 (+)
LOC110522372 wasf1 coding upstream 180839 26327551 ~ 26465676 (+)
LOC110522374 mettl24 coding upstream 365951 26216401 ~ 26280564 (+)
LOC110522377 LOC106607986 coding upstream 468698 26059992 ~ 26177817 (+)
snx3 snx3 coding downstream 219568 26935835 ~ 26961848 (+)
LOC110522356 ostm1 coding downstream 282225 26998492 ~ 27004619 (+)
LOC110522355 plekhg1 coding downstream 338361 27054628 ~ 27185449 (+)
tcp1 tcp1 coding downstream 470198 27186465 ~ 27195351 (+)
LOC110522432 otof coding downstream 685830 27402097 ~ 27524388 (+)
G336295 NA non-coding upstream 15052 26596692 ~ 26631463 (+)
G336244 NA non-coding upstream 131968 26513951 ~ 26514547 (+)
G336234 NA non-coding upstream 142954 26503297 ~ 26503561 (+)
G336221 NA non-coding upstream 156361 26489708 ~ 26490154 (+)
G336154 NA non-coding upstream 215211 26339937 ~ 26431304 (+)
G336382 NA non-coding downstream 21256 26737523 ~ 26739412 (+)
G336399 NA non-coding downstream 51151 26767418 ~ 26767994 (+)
G336429 NA non-coding downstream 112047 26828314 ~ 26828550 (+)
G336455 NA non-coding downstream 159506 26875773 ~ 26876169 (+)
G336461 NA non-coding downstream 167095 26883362 ~ 26883618 (+)
LOC110522376 sash1 other upstream 588824 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 2223784 24420114 ~ 24422731 (+)
G334475 NA other upstream 2227569 24417582 ~ 24418946 (+)
si:ch211-51e12.7 NA other upstream 2576839 24063831 ~ 24072963 (+)
G334116 NA other upstream 2812093 23833821 ~ 23837875 (+)
G336464 NA other downstream 176868 26892229 ~ 26894837 (+)
LOC118964415 LOC106608050 other downstream 874585 27537262 ~ 27601564 (+)
G339660 NA other downstream 2142449 28858716 ~ 28859155 (+)
G339693 NA other downstream 2198332 28914599 ~ 28915539 (+)

Expression


Co-expression Network