Gene
RNA
| Item | Value |
|---|---|
| gene id | G336466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 26888641 ~ 26889183 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU380936 | False | 261 | lncRNA | 0.51 | 3 | 26888641 | 26889183 |
| TU380937 | True | 241 | lncRNA | 0.51 | 2 | 26888807 | 26889183 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sesn1 | sesn1 | coding | upstream | 132097 | 26686142 ~ 26756544 (+) |
| LOC110522366 | cd164 | coding | upstream | 220884 | 26651503 ~ 26667757 (+) |
| ppil6 | ppil6 | coding | upstream | 246423 | 26624912 ~ 26642218 (+) |
| ak9 | ak9 | coding | upstream | 263972 | 26603396 ~ 26624669 (+) |
| LOC110522372 | wasf1 | coding | upstream | 422965 | 26327551 ~ 26465676 (+) |
| snx3 | snx3 | coding | downstream | 46652 | 26935835 ~ 26961848 (+) |
| LOC110522356 | ostm1 | coding | downstream | 109309 | 26998492 ~ 27004619 (+) |
| LOC110522355 | plekhg1 | coding | downstream | 165445 | 27054628 ~ 27185449 (+) |
| tcp1 | tcp1 | coding | downstream | 297282 | 27186465 ~ 27195351 (+) |
| LOC110522432 | otof | coding | downstream | 512914 | 27402097 ~ 27524388 (+) |
| G336463 | NA | non-coding | upstream | 3303 | 26885134 ~ 26885338 (+) |
| G336461 | NA | non-coding | upstream | 5023 | 26883362 ~ 26883618 (+) |
| G336455 | NA | non-coding | upstream | 12472 | 26875773 ~ 26876169 (+) |
| G336429 | NA | non-coding | upstream | 60091 | 26828314 ~ 26828550 (+) |
| G336399 | NA | non-coding | upstream | 120647 | 26767418 ~ 26767994 (+) |
| G336464 | NA | non-coding | downstream | 3046 | 26892229 ~ 26894837 (+) |
| G336519 | NA | non-coding | downstream | 89004 | 26978187 ~ 26978399 (+) |
| G336550 | NA | non-coding | downstream | 155519 | 27044702 ~ 27045693 (+) |
| G336650 | wtap | non-coding | downstream | 317646 | 27206829 ~ 27213254 (+) |
| G336705 | NA | non-coding | downstream | 407363 | 27296546 ~ 27298077 (+) |
| LOC110522376 | sash1 | other | upstream | 830950 | 25761890 ~ 26057813 (+) |
| G334473 | armt1 | other | upstream | 2465910 | 24420114 ~ 24422731 (+) |
| G334475 | NA | other | upstream | 2469695 | 24417582 ~ 24418946 (+) |
| si:ch211-51e12.7 | NA | other | upstream | 2818965 | 24063831 ~ 24072963 (+) |
| G334116 | NA | other | upstream | 3054219 | 23833821 ~ 23837875 (+) |
| LOC118964415 | LOC106608050 | other | downstream | 701669 | 27537262 ~ 27601564 (+) |
| G339660 | NA | other | downstream | 1969533 | 28858716 ~ 28859155 (+) |
| G339693 | NA | other | downstream | 2025416 | 28914599 ~ 28915539 (+) |
