Gene
RNA
| Item | Value |
|---|---|
| gene id | G336705 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 27296546 ~ 27298077 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU381193 | True | 994 | lncRNA | 0.40 | 2 | 27296546 | 27298077 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tcp1 | tcp1 | coding | upstream | 101195 | 27186465 ~ 27195351 (+) |
| LOC110522355 | plekhg1 | coding | upstream | 111097 | 27054628 ~ 27185449 (+) |
| LOC110522356 | ostm1 | coding | upstream | 291927 | 26998492 ~ 27004619 (+) |
| snx3 | snx3 | coding | upstream | 334698 | 26935835 ~ 26961848 (+) |
| sesn1 | sesn1 | coding | upstream | 540002 | 26686142 ~ 26756544 (+) |
| LOC110522432 | otof | coding | downstream | 104020 | 27402097 ~ 27524388 (+) |
| LOC118964415 | LOC106608050 | coding | downstream | 239185 | 27537262 ~ 27601564 (+) |
| opn8b | LOC106608041 | coding | downstream | 326623 | 27624700 ~ 27664419 (+) |
| LOC110522435 | wdcp | coding | downstream | 459356 | 27757433 ~ 27764552 (+) |
| LOC110522440 | atad2b | coding | downstream | 502846 | 27800923 ~ 27962367 (+) |
| G336650 | wtap | non-coding | upstream | 83292 | 27206829 ~ 27213254 (+) |
| G336550 | NA | non-coding | upstream | 250853 | 27044702 ~ 27045693 (+) |
| G336519 | NA | non-coding | upstream | 318147 | 26978187 ~ 26978399 (+) |
| G336464 | NA | non-coding | upstream | 401709 | 26892229 ~ 26894837 (+) |
| G336466 | NA | non-coding | upstream | 407363 | 26888641 ~ 26889183 (+) |
| G336709 | fndc1 | non-coding | downstream | 4595 | 27302672 ~ 27305939 (+) |
| G336723 | NA | non-coding | downstream | 29802 | 27327879 ~ 27371054 (+) |
| G336724 | NA | non-coding | downstream | 36047 | 27334124 ~ 27340999 (+) |
| G336725 | NA | non-coding | downstream | 36587 | 27334664 ~ 27336220 (+) |
| G336727 | NA | non-coding | downstream | 38241 | 27336318 ~ 27340011 (+) |
| LOC110522376 | sash1 | other | upstream | 1238855 | 25761890 ~ 26057813 (+) |
| G334473 | armt1 | other | upstream | 2873815 | 24420114 ~ 24422731 (+) |
| G334475 | NA | other | upstream | 2877600 | 24417582 ~ 24418946 (+) |
| G339660 | NA | other | downstream | 1560639 | 28858716 ~ 28859155 (+) |
| G339693 | NA | other | downstream | 1616522 | 28914599 ~ 28915539 (+) |
| G339830 | LOC100846954 | other | downstream | 1868441 | 29166518 ~ 29166996 (+) |
| G339928 | NA | other | downstream | 2037292 | 29335369 ~ 29336939 (+) |
