Gene
RNA
| Item | Value |
|---|---|
| gene id | G338328 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 27601731 ~ 27602437 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU382950 | True | 672 | lncRNA | 0.39 | 2 | 27601731 | 27602437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964415 | LOC106608050 | coding | upstream | 167 | 27537262 ~ 27601564 (+) |
| LOC110522432 | otof | coding | upstream | 77343 | 27402097 ~ 27524388 (+) |
| tcp1 | tcp1 | coding | upstream | 406380 | 27186465 ~ 27195351 (+) |
| LOC110522355 | plekhg1 | coding | upstream | 416282 | 27054628 ~ 27185449 (+) |
| LOC110522356 | ostm1 | coding | upstream | 597112 | 26998492 ~ 27004619 (+) |
| opn8b | LOC106608041 | coding | downstream | 22263 | 27624700 ~ 27664419 (+) |
| LOC110522435 | wdcp | coding | downstream | 154996 | 27757433 ~ 27764552 (+) |
| LOC110522440 | atad2b | coding | downstream | 198486 | 27800923 ~ 27962367 (+) |
| LOC118964460 | NA | coding | downstream | 268706 | 27871143 ~ 27872978 (+) |
| LOC110522445 | LOC106608054 | coding | downstream | 955763 | 28558200 ~ 28567300 (+) |
| G336777 | NA | non-coding | upstream | 147394 | 27451518 ~ 27454337 (+) |
| G336742 | NA | non-coding | upstream | 164680 | 27395375 ~ 27437051 (+) |
| G336723 | NA | non-coding | upstream | 230677 | 27327879 ~ 27371054 (+) |
| G338358 | NA | non-coding | downstream | 20938 | 27623375 ~ 27623670 (+) |
| G338363 | NA | non-coding | downstream | 23106 | 27625543 ~ 27625857 (+) |
| G338379 | NA | non-coding | downstream | 38048 | 27640485 ~ 27640826 (+) |
| G338383 | NA | non-coding | downstream | 45610 | 27648047 ~ 27648268 (+) |
| G336464 | NA | other | upstream | 706894 | 26892229 ~ 26894837 (+) |
| LOC110522376 | sash1 | other | upstream | 1544040 | 25761890 ~ 26057813 (+) |
| G334473 | armt1 | other | upstream | 3179000 | 24420114 ~ 24422731 (+) |
| G339660 | NA | other | downstream | 1256279 | 28858716 ~ 28859155 (+) |
| G339693 | NA | other | downstream | 1312162 | 28914599 ~ 28915539 (+) |
| G339830 | LOC100846954 | other | downstream | 1564081 | 29166518 ~ 29166996 (+) |
| G339928 | NA | other | downstream | 1732932 | 29335369 ~ 29336939 (+) |
| G342538 | NA | other | downstream | 3779389 | 31381826 ~ 31382749 (+) |
