Gene
RNA
| Item | Value |
|---|---|
| gene id | G338363 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 27625543 ~ 27625857 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU382985 | True | 315 | lncRNA | 0.40 | 1 | 27625543 | 27625857 |
27,623,600
27,624,000
27,624,400
27,624,800
27,625,200
27,625,600
27,626,000
27,626,000
27,626,400
27,626,800
27,627,200
27,627,600
27,628,000
27,628,400
NC_048568.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964415 | LOC106608050 | coding | upstream | 23979 | 27537262 ~ 27601564 (+) |
| LOC110522432 | otof | coding | upstream | 101155 | 27402097 ~ 27524388 (+) |
| tcp1 | tcp1 | coding | upstream | 430192 | 27186465 ~ 27195351 (+) |
| LOC110522355 | plekhg1 | coding | upstream | 440094 | 27054628 ~ 27185449 (+) |
| LOC110522356 | ostm1 | coding | upstream | 620924 | 26998492 ~ 27004619 (+) |
| LOC110522435 | wdcp | coding | downstream | 131576 | 27757433 ~ 27764552 (+) |
| LOC110522440 | atad2b | coding | downstream | 175066 | 27800923 ~ 27962367 (+) |
| LOC118964460 | NA | coding | downstream | 245286 | 27871143 ~ 27872978 (+) |
| LOC110522445 | LOC106608054 | coding | downstream | 932343 | 28558200 ~ 28567300 (+) |
| LOC110522446 | bmp2 | coding | downstream | 1004147 | 28630004 ~ 28636513 (+) |
| G338358 | NA | non-coding | upstream | 1873 | 27623375 ~ 27623670 (+) |
| G338328 | NA | non-coding | upstream | 23106 | 27601731 ~ 27602437 (+) |
| G336777 | NA | non-coding | upstream | 171206 | 27451518 ~ 27454337 (+) |
| G336742 | NA | non-coding | upstream | 188492 | 27395375 ~ 27437051 (+) |
| G336727 | NA | non-coding | upstream | 285532 | 27336318 ~ 27340011 (+) |
| G338379 | NA | non-coding | downstream | 14628 | 27640485 ~ 27640826 (+) |
| G338383 | NA | non-coding | downstream | 22190 | 27648047 ~ 27648268 (+) |
| opn8b | LOC106608041 | non-coding | downstream | 37448 | 27624700 ~ 27664419 (+) |
| G338376 | NA | non-coding | downstream | 39606 | 27665463 ~ 27665851 (+) |
| G338426 | NA | non-coding | downstream | 55350 | 27681207 ~ 27681450 (+) |
| G336464 | NA | other | upstream | 730706 | 26892229 ~ 26894837 (+) |
| LOC110522376 | sash1 | other | upstream | 1567852 | 25761890 ~ 26057813 (+) |
| G334473 | armt1 | other | upstream | 3202812 | 24420114 ~ 24422731 (+) |
| G339660 | NA | other | downstream | 1232859 | 28858716 ~ 28859155 (+) |
| G339693 | NA | other | downstream | 1288742 | 28914599 ~ 28915539 (+) |
| G339830 | LOC100846954 | other | downstream | 1540661 | 29166518 ~ 29166996 (+) |
| G339928 | NA | other | downstream | 1709512 | 29335369 ~ 29336939 (+) |
| G342538 | NA | other | downstream | 3755969 | 31381826 ~ 31382749 (+) |
