Gene
RNA
| Item | Value |
|---|---|
| gene id | G338605 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 28013024 ~ 28040623 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU383241 | True | 254 | lncRNA | 0.35 | 2 | 28013024 | 28040623 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522440 | atad2b | coding | upstream | 50657 | 27800923 ~ 27962367 (+) |
| LOC118964460 | NA | coding | upstream | 140046 | 27871143 ~ 27872978 (+) |
| LOC110522435 | wdcp | coding | upstream | 248472 | 27757433 ~ 27764552 (+) |
| opn8b | LOC106608041 | coding | upstream | 348605 | 27624700 ~ 27664419 (+) |
| LOC118964415 | LOC106608050 | coding | upstream | 411460 | 27537262 ~ 27601564 (+) |
| LOC110522445 | LOC106608054 | coding | downstream | 517577 | 28558200 ~ 28567300 (+) |
| LOC110522446 | bmp2 | coding | downstream | 589381 | 28630004 ~ 28636513 (+) |
| LOC110521072 | plcb1 | coding | downstream | 658444 | 28699067 ~ 28934753 (+) |
| LOC110522448 | plcb4 | coding | downstream | 917461 | 28958084 ~ 29140138 (+) |
| LOC110522450 | LOC106608065 | coding | downstream | 1112851 | 29153474 ~ 29163882 (+) |
| G338504 | NA | non-coding | upstream | 48622 | 27962713 ~ 27964402 (+) |
| G338570 | NA | non-coding | upstream | 54275 | 27957453 ~ 27958749 (+) |
| G338569 | NA | non-coding | upstream | 58611 | 27954159 ~ 27954413 (+) |
| G338568 | NA | non-coding | upstream | 59037 | 27953688 ~ 27953987 (+) |
| G338724 | NA | non-coding | downstream | 159795 | 28200418 ~ 28201053 (+) |
| G338731 | NA | non-coding | downstream | 167774 | 28208397 ~ 28211502 (+) |
| G338732 | NA | non-coding | downstream | 168341 | 28208964 ~ 28212157 (+) |
| G338813 | NA | non-coding | downstream | 297410 | 28338033 ~ 28354687 (+) |
| G339254 | NA | non-coding | downstream | 344982 | 28385605 ~ 28385890 (+) |
| LOC110522355 | plekhg1 | other | upstream | 828054 | 27054628 ~ 27185449 (+) |
| G336464 | NA | other | upstream | 1118187 | 26892229 ~ 26894837 (+) |
| LOC110522376 | sash1 | other | upstream | 1955333 | 25761890 ~ 26057813 (+) |
| G334473 | armt1 | other | upstream | 3590293 | 24420114 ~ 24422731 (+) |
| G339660 | NA | other | downstream | 818093 | 28858716 ~ 28859155 (+) |
| G339693 | NA | other | downstream | 873976 | 28914599 ~ 28915539 (+) |
| G339830 | LOC100846954 | other | downstream | 1125895 | 29166518 ~ 29166996 (+) |
| G339928 | NA | other | downstream | 1294746 | 29335369 ~ 29336939 (+) |
| G342538 | NA | other | downstream | 3341203 | 31381826 ~ 31382749 (+) |
