G338813



Basic Information


Item Value
gene id G338813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 28338033 ~ 28354687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU383461
tggggcggcagggtggcctagtggttagagcgttggactagtaaccggaaggttgtgagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcccaggccgtcattgaaaataagaatttgttcttaactgacttgcctggttaattaaaggtaaaataaaataaaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU383461 True 203 lncRNA 0.46 2 28338033 28354687

Neighbor


gene id symbol gene type direction distance location
LOC110522440 atad2b coding upstream 375666 27800923 ~ 27962367 (+)
LOC118964460 NA coding upstream 465055 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 573481 27757433 ~ 27764552 (+)
opn8b LOC106608041 coding upstream 673614 27624700 ~ 27664419 (+)
LOC118964415 LOC106608050 coding upstream 736469 27537262 ~ 27601564 (+)
LOC110522445 LOC106608054 coding downstream 203513 28558200 ~ 28567300 (+)
LOC110522446 bmp2 coding downstream 275317 28630004 ~ 28636513 (+)
LOC110521072 plcb1 coding downstream 344380 28699067 ~ 28934753 (+)
LOC110522448 plcb4 coding downstream 603397 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 798787 29153474 ~ 29163882 (+)
G338732 NA non-coding upstream 125876 28208964 ~ 28212157 (+)
G338731 NA non-coding upstream 126531 28208397 ~ 28211502 (+)
G338724 NA non-coding upstream 136980 28200418 ~ 28201053 (+)
G338605 NA non-coding upstream 297410 28013024 ~ 28040623 (+)
G338564 klhl29 non-coding upstream 303002 28010919 ~ 28035031 (+)
G339254 NA non-coding downstream 30918 28385605 ~ 28385890 (+)
G339265 NA non-coding downstream 41205 28395892 ~ 28396102 (+)
G339334 LOC100194698 non-coding downstream 136569 28491256 ~ 28497762 (+)
G339362 NA non-coding downstream 191026 28545713 ~ 28552313 (+)
G339376 NA non-coding downstream 216632 28571319 ~ 28572767 (+)
LOC110522355 plekhg1 other upstream 1153063 27054628 ~ 27185449 (+)
G336464 NA other upstream 1443196 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 2280342 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 3915302 24420114 ~ 24422731 (+)
G339660 NA other downstream 504029 28858716 ~ 28859155 (+)
G339693 NA other downstream 559912 28914599 ~ 28915539 (+)
G339830 LOC100846954 other downstream 811831 29166518 ~ 29166996 (+)
G339928 NA other downstream 980682 29335369 ~ 29336939 (+)
G342538 NA other downstream 3027139 31381826 ~ 31382749 (+)

Expression



Co-expression Network