G339669


Basic Information

Item Value
gene id G339669
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 28869322 ~ 28869537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384416
ataggctacctggcctgattatacatagaagtaggcctataggctacctggcctgattatacatagaagtaggcctataggctacctggcctgattatacATATAAGTAGGcatataggctacctggcctgattatacATATAAgtaggcatatagactacatgacctgattatacatagaagtaggcctataggctacctgaccTGATTATACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384416 True 216 lncRNA 0.41 1 28869322 28869537

Neighbor

gene id symbol gene type direction distance location
LOC110522446 bmp2 coding upstream 232809 28630004 ~ 28636513 (+)
LOC110522445 LOC106608054 coding upstream 302022 28558200 ~ 28567300 (+)
LOC110522440 atad2b coding upstream 906955 27800923 ~ 27962367 (+)
LOC118964460 NA coding upstream 996344 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 1104770 27757433 ~ 27764552 (+)
LOC110522448 plcb4 coding downstream 88547 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 283937 29153474 ~ 29163882 (+)
LOC118964462 NA coding downstream 305789 29174963 ~ 29176894 (+)
LOC118964461 NA coding downstream 313342 29182879 ~ 29186037 (+)
LOC110522451 LOC106608077 coding downstream 469999 29339536 ~ 29348164 (+)
G339668 NA non-coding upstream 1077 28867926 ~ 28868245 (+)
G339666 NA non-coding upstream 4392 28864567 ~ 28864930 (+)
G339662 NA non-coding upstream 8255 28859944 ~ 28861067 (+)
G339649 NA non-coding upstream 35917 28833139 ~ 28833405 (+)
G339615 NA non-coding upstream 96221 28772785 ~ 28773101 (+)
G339670 NA non-coding downstream 5035 28874572 ~ 28874791 (+)
G339671 NA non-coding downstream 5946 28875483 ~ 28875691 (+)
G339674 NA non-coding downstream 10686 28880223 ~ 28880458 (+)
G339693 NA non-coding downstream 45062 28914599 ~ 28915539 (+)
G339694 NA non-coding downstream 46753 28916290 ~ 28917570 (+)
G339660 NA other upstream 10167 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 1267766 27537262 ~ 27601564 (+)
LOC110522355 plekhg1 other upstream 1684352 27054628 ~ 27185449 (+)
G336464 NA other upstream 1974485 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 2811631 25761890 ~ 26057813 (+)
G339830 LOC100846954 other downstream 296981 29166518 ~ 29166996 (+)
G339928 NA other downstream 465832 29335369 ~ 29336939 (+)
G342538 NA other downstream 2512289 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 2548418 31417955 ~ 31422086 (+)

Expression


Co-expression Network