G339671


Basic Information

Item Value
gene id G339671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 28875483 ~ 28875691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384418
CTCAAACACCCCGGAAATTCAGTGAGCTCCAAAACTATTGGGACAttgacacatttgttgttgttttggctctgcaccttagatttaaaatgatacaatgactttgttaaggtgcagactgtcagctttaaagGGATATTTCTGTCTCTTGGCAGAGGGAGACAATAATATTTCTAACAAGTCATAACTGATGACTTTATGGCCAGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384418 True 209 lncRNA 0.40 1 28875483 28875691

Neighbor

gene id symbol gene type direction distance location
LOC110522446 bmp2 coding upstream 238970 28630004 ~ 28636513 (+)
LOC110522445 LOC106608054 coding upstream 308183 28558200 ~ 28567300 (+)
LOC110522440 atad2b coding upstream 913116 27800923 ~ 27962367 (+)
LOC118964460 NA coding upstream 1002505 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 1110931 27757433 ~ 27764552 (+)
LOC110522448 plcb4 coding downstream 82393 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 277783 29153474 ~ 29163882 (+)
LOC118964462 NA coding downstream 299635 29174963 ~ 29176894 (+)
LOC118964461 NA coding downstream 307188 29182879 ~ 29186037 (+)
LOC110522451 LOC106608077 coding downstream 463845 29339536 ~ 29348164 (+)
G339670 NA non-coding upstream 692 28874572 ~ 28874791 (+)
G339669 NA non-coding upstream 5946 28869322 ~ 28869537 (+)
G339668 NA non-coding upstream 7238 28867926 ~ 28868245 (+)
G339666 NA non-coding upstream 10553 28864567 ~ 28864930 (+)
G339662 NA non-coding upstream 14416 28859944 ~ 28861067 (+)
G339674 NA non-coding downstream 4532 28880223 ~ 28880458 (+)
G339693 NA non-coding downstream 38908 28914599 ~ 28915539 (+)
G339694 NA non-coding downstream 40599 28916290 ~ 28917570 (+)
G339578 NA non-coding downstream 59497 28935188 ~ 28936178 (+)
G339577 NA non-coding downstream 60633 28936324 ~ 28939133 (+)
G339660 NA other upstream 16328 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 1273927 27537262 ~ 27601564 (+)
LOC110522355 plekhg1 other upstream 1690513 27054628 ~ 27185449 (+)
G336464 NA other upstream 1980646 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 2817792 25761890 ~ 26057813 (+)
G339830 LOC100846954 other downstream 290827 29166518 ~ 29166996 (+)
G339928 NA other downstream 459678 29335369 ~ 29336939 (+)
G342538 NA other downstream 2506135 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 2542264 31417955 ~ 31422086 (+)

Expression


Co-expression Network