Item | Value |
---|---|
gene id | G339674 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048568.1 |
NCBI id | CM023222.3 |
chromosome length | 46841314 |
location | 28880223 ~ 28880458 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU384421 | True | 236 | lncRNA | 0.43 | 1 | 28880223 | 28880458 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110522446 | bmp2 | coding | upstream | 243710 | 28630004 ~ 28636513 (+) |
LOC110522445 | LOC106608054 | coding | upstream | 312923 | 28558200 ~ 28567300 (+) |
LOC110522440 | atad2b | coding | upstream | 917856 | 27800923 ~ 27962367 (+) |
LOC118964460 | NA | coding | upstream | 1007245 | 27871143 ~ 27872978 (+) |
LOC110522435 | wdcp | coding | upstream | 1115671 | 27757433 ~ 27764552 (+) |
LOC110522448 | plcb4 | coding | downstream | 77626 | 28958084 ~ 29140138 (+) |
LOC110522450 | LOC106608065 | coding | downstream | 273016 | 29153474 ~ 29163882 (+) |
LOC118964462 | NA | coding | downstream | 294868 | 29174963 ~ 29176894 (+) |
LOC118964461 | NA | coding | downstream | 302421 | 29182879 ~ 29186037 (+) |
LOC110522451 | LOC106608077 | coding | downstream | 459078 | 29339536 ~ 29348164 (+) |
G339671 | NA | non-coding | upstream | 4532 | 28875483 ~ 28875691 (+) |
G339670 | NA | non-coding | upstream | 5432 | 28874572 ~ 28874791 (+) |
G339669 | NA | non-coding | upstream | 10686 | 28869322 ~ 28869537 (+) |
G339668 | NA | non-coding | upstream | 11978 | 28867926 ~ 28868245 (+) |
G339666 | NA | non-coding | upstream | 15293 | 28864567 ~ 28864930 (+) |
G339693 | NA | non-coding | downstream | 34141 | 28914599 ~ 28915539 (+) |
G339694 | NA | non-coding | downstream | 35832 | 28916290 ~ 28917570 (+) |
G339578 | NA | non-coding | downstream | 54730 | 28935188 ~ 28936178 (+) |
G339577 | NA | non-coding | downstream | 55866 | 28936324 ~ 28939133 (+) |
G339747 | NA | non-coding | downstream | 99321 | 28979779 ~ 28980504 (+) |
G339660 | NA | other | upstream | 21068 | 28858716 ~ 28859155 (+) |
LOC118964415 | LOC106608050 | other | upstream | 1278667 | 27537262 ~ 27601564 (+) |
LOC110522355 | plekhg1 | other | upstream | 1695253 | 27054628 ~ 27185449 (+) |
G336464 | NA | other | upstream | 1985386 | 26892229 ~ 26894837 (+) |
LOC110522376 | sash1 | other | upstream | 2822532 | 25761890 ~ 26057813 (+) |
G339830 | LOC100846954 | other | downstream | 286060 | 29166518 ~ 29166996 (+) |
G339928 | NA | other | downstream | 454911 | 29335369 ~ 29336939 (+) |
G342538 | NA | other | downstream | 2501368 | 31381826 ~ 31382749 (+) |
LOC110522493 | LOC106608104 | other | downstream | 2537497 | 31417955 ~ 31422086 (+) |