Gene
RNA
| Item | Value |
|---|---|
| gene id | G339693 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 28914599 ~ 28915539 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU384440 | False | 263 | lncRNA | 0.45 | 2 | 28914599 | 28915063 |
| TU384441 | True | 571 | TUCP | 0.42 | 3 | 28914599 | 28915539 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522446 | bmp2 | coding | upstream | 278086 | 28630004 ~ 28636513 (+) |
| LOC110522445 | LOC106608054 | coding | upstream | 347299 | 28558200 ~ 28567300 (+) |
| LOC110522440 | atad2b | coding | upstream | 952232 | 27800923 ~ 27962367 (+) |
| LOC118964460 | NA | coding | upstream | 1041621 | 27871143 ~ 27872978 (+) |
| LOC110522435 | wdcp | coding | upstream | 1150047 | 27757433 ~ 27764552 (+) |
| LOC110522448 | plcb4 | coding | downstream | 43021 | 28958084 ~ 29140138 (+) |
| LOC110522450 | LOC106608065 | coding | downstream | 238411 | 29153474 ~ 29163882 (+) |
| LOC118964462 | NA | coding | downstream | 260263 | 29174963 ~ 29176894 (+) |
| LOC118964461 | NA | coding | downstream | 267816 | 29182879 ~ 29186037 (+) |
| LOC110522451 | LOC106608077 | coding | downstream | 424473 | 29339536 ~ 29348164 (+) |
| G339674 | NA | non-coding | upstream | 34141 | 28880223 ~ 28880458 (+) |
| G339671 | NA | non-coding | upstream | 38908 | 28875483 ~ 28875691 (+) |
| G339670 | NA | non-coding | upstream | 39808 | 28874572 ~ 28874791 (+) |
| G339669 | NA | non-coding | upstream | 45062 | 28869322 ~ 28869537 (+) |
| G339668 | NA | non-coding | upstream | 46354 | 28867926 ~ 28868245 (+) |
| G339694 | NA | non-coding | downstream | 1227 | 28916290 ~ 28917570 (+) |
| G339578 | NA | non-coding | downstream | 20125 | 28935188 ~ 28936178 (+) |
| G339577 | NA | non-coding | downstream | 21261 | 28936324 ~ 28939133 (+) |
| G339747 | NA | non-coding | downstream | 64716 | 28979779 ~ 28980504 (+) |
| G339767 | NA | non-coding | downstream | 83892 | 28998955 ~ 29001114 (+) |
| G339660 | NA | other | upstream | 55444 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 1313043 | 27537262 ~ 27601564 (+) |
| LOC110522355 | plekhg1 | other | upstream | 1729629 | 27054628 ~ 27185449 (+) |
| G336464 | NA | other | upstream | 2019762 | 26892229 ~ 26894837 (+) |
| LOC110522376 | sash1 | other | upstream | 2856908 | 25761890 ~ 26057813 (+) |
| G339830 | LOC100846954 | other | downstream | 251455 | 29166518 ~ 29166996 (+) |
| G339928 | NA | other | downstream | 420306 | 29335369 ~ 29336939 (+) |
| G342538 | NA | other | downstream | 2466763 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 2502892 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 2536070 | 31451133 ~ 31451476 (+) |
