G339694


Basic Information

Item Value
gene id G339694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 28916290 ~ 28917570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384443
CTAGTGTTAGATCTGTCGTTGCACAATATTTCAGACATGAAGGGAAAAAACTAAAAAACTAcgaaaagaaaagctgaaatatttactacagAGAAAACATAATATAAAAAAATTAACTATGACAAATTGAACAACTAAAAAGCACACTAAGGAAAAGCATAGCTAAGAAAATGTGTCCACAGTTTCAGCCCCCCTCCGCTTCTCGGGCAGGCAATTCCAGAacctgggggcataataactaaaggctgtctctccatgcctcttggtcctaggctataggatagttaaaaggccagtgccagaggacctggagggacctactgggtacataacctAATAGCATGTCTGACATTTATTGGGGTGCACATTCATGGATTGGTATAAAAACCAATACAACTCATCACATTTTGATGTGGAGGAAAGTTCACATTTTGCAGGGGTAGGATTTATCAGGCCGTCAAGAAGATCACTCTCAAATGATTCTGATTATTAGAAAATGAGCCCGTCTGGCATTTCTAATTGACTTGTTATATAT

Function

NR:

description
CR1-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384443 True 535 lncRNA 0.39 2 28916290 28917570

Neighbor

gene id symbol gene type direction distance location
LOC110522446 bmp2 coding upstream 279777 28630004 ~ 28636513 (+)
LOC110522445 LOC106608054 coding upstream 348990 28558200 ~ 28567300 (+)
LOC110522440 atad2b coding upstream 953923 27800923 ~ 27962367 (+)
LOC118964460 NA coding upstream 1043312 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 1151738 27757433 ~ 27764552 (+)
LOC110522448 plcb4 coding downstream 40514 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 235904 29153474 ~ 29163882 (+)
LOC118964462 NA coding downstream 257756 29174963 ~ 29176894 (+)
LOC118964461 NA coding downstream 265309 29182879 ~ 29186037 (+)
LOC110522451 LOC106608077 coding downstream 421966 29339536 ~ 29348164 (+)
G339693 NA non-coding upstream 1227 28914599 ~ 28915539 (+)
G339674 NA non-coding upstream 35832 28880223 ~ 28880458 (+)
G339671 NA non-coding upstream 40599 28875483 ~ 28875691 (+)
G339670 NA non-coding upstream 41499 28874572 ~ 28874791 (+)
G339669 NA non-coding upstream 46753 28869322 ~ 28869537 (+)
G339578 NA non-coding downstream 17618 28935188 ~ 28936178 (+)
G339577 NA non-coding downstream 18754 28936324 ~ 28939133 (+)
G339747 NA non-coding downstream 62209 28979779 ~ 28980504 (+)
G339767 NA non-coding downstream 81385 28998955 ~ 29001114 (+)
G339781 NA non-coding downstream 98899 29016469 ~ 29023453 (+)
G339660 NA other upstream 57135 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 1314734 27537262 ~ 27601564 (+)
LOC110522355 plekhg1 other upstream 1731320 27054628 ~ 27185449 (+)
G336464 NA other upstream 2021453 26892229 ~ 26894837 (+)
G339830 LOC100846954 other downstream 248948 29166518 ~ 29166996 (+)
G339928 NA other downstream 417799 29335369 ~ 29336939 (+)
G342538 NA other downstream 2464256 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 2500385 31417955 ~ 31422086 (+)
G342571 NA other downstream 2533563 31451133 ~ 31451476 (+)

Expression


Co-expression Network