G339721


Basic Information

Item Value
gene id G339721
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 29142007 ~ 29142351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384507
aaaattattcagcccctttactttcagtgcggcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaaggcggatttggatacaaaaagatttctcaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagacca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384507 True 345 lncRNA 0.41 1 29142007 29142351

Neighbor

gene id symbol gene type direction distance location
LOC110522448 plcb4 coding upstream 1869 28958084 ~ 29140138 (+)
LOC110521072 plcb1 coding upstream 207254 28699067 ~ 28934753 (+)
LOC110522446 bmp2 coding upstream 505494 28630004 ~ 28636513 (+)
LOC110522445 LOC106608054 coding upstream 574707 28558200 ~ 28567300 (+)
LOC110522440 atad2b coding upstream 1179640 27800923 ~ 27962367 (+)
LOC110522450 LOC106608065 coding downstream 11123 29153474 ~ 29163882 (+)
LOC118964462 NA coding downstream 32975 29174963 ~ 29176894 (+)
LOC118964461 NA coding downstream 40528 29182879 ~ 29186037 (+)
LOC110522451 LOC106608077 coding downstream 197185 29339536 ~ 29348164 (+)
LOC110522452 LOC106608075 coding downstream 279943 29422294 ~ 29461382 (+)
G339781 NA non-coding upstream 118554 29016469 ~ 29023453 (+)
G339767 NA non-coding upstream 140893 28998955 ~ 29001114 (+)
G339747 NA non-coding upstream 161503 28979779 ~ 28980504 (+)
G339577 NA non-coding upstream 202874 28936324 ~ 28939133 (+)
G339578 NA non-coding upstream 205829 28935188 ~ 28936178 (+)
G339719 NA non-coding downstream 640 29142991 ~ 29146900 (+)
G339841 NA non-coding downstream 53460 29195811 ~ 29196058 (+)
G339844 LOC106608064 non-coding downstream 57972 29200323 ~ 29201127 (+)
G339848 NA non-coding downstream 66026 29208377 ~ 29208841 (+)
G339693 NA other upstream 226468 28914599 ~ 28915539 (+)
G339660 NA other upstream 282852 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 1540451 27537262 ~ 27601564 (+)
LOC110522355 plekhg1 other upstream 1957037 27054628 ~ 27185449 (+)
G336464 NA other upstream 2247170 26892229 ~ 26894837 (+)
G339830 LOC100846954 other downstream 24167 29166518 ~ 29166996 (+)
G339928 NA other downstream 193018 29335369 ~ 29336939 (+)
G342538 NA other downstream 2239475 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 2275604 31417955 ~ 31422086 (+)
G342571 NA other downstream 2308782 31451133 ~ 31451476 (+)

Expression


Co-expression Network