Gene
RNA
| Item | Value |
|---|---|
| gene id | G339844 |
| gene name | LOC106608064 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29200323 ~ 29201127 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/threonine-protein kinase PAK 5-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU384643 | True | 781 | lncRNA | 0.63 | 2 | 29200323 | 29201127 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964461 | NA | coding | upstream | 14286 | 29182879 ~ 29186037 (+) |
| LOC118964462 | NA | coding | upstream | 23429 | 29174963 ~ 29176894 (+) |
| LOC110522450 | LOC106608065 | coding | upstream | 36441 | 29153474 ~ 29163882 (+) |
| LOC110522448 | plcb4 | coding | upstream | 60185 | 28958084 ~ 29140138 (+) |
| LOC110521072 | plcb1 | coding | upstream | 265570 | 28699067 ~ 28934753 (+) |
| LOC110522451 | LOC106608077 | coding | downstream | 138409 | 29339536 ~ 29348164 (+) |
| LOC110522452 | LOC106608075 | coding | downstream | 221167 | 29422294 ~ 29461382 (+) |
| LOC110522453 | LOC106608073 | coding | downstream | 262828 | 29463955 ~ 29478206 (+) |
| LOC110522454 | LOC105017530 | coding | downstream | 279049 | 29480176 ~ 29632371 (+) |
| LOC110522456 | LOC106608096 | coding | downstream | 432549 | 29633676 ~ 29641117 (+) |
| G339841 | NA | non-coding | upstream | 4265 | 29195811 ~ 29196058 (+) |
| G339719 | NA | non-coding | upstream | 53423 | 29142991 ~ 29146900 (+) |
| G339721 | NA | non-coding | upstream | 57972 | 29142007 ~ 29142351 (+) |
| G339781 | NA | non-coding | upstream | 176870 | 29016469 ~ 29023453 (+) |
| G339848 | NA | non-coding | downstream | 7250 | 29208377 ~ 29208841 (+) |
| G339849 | NA | non-coding | downstream | 7870 | 29208997 ~ 29209272 (+) |
| G339854 | NA | non-coding | downstream | 15604 | 29216731 ~ 29217221 (+) |
| G339855 | NA | non-coding | downstream | 18220 | 29219347 ~ 29219770 (+) |
| G339856 | NA | non-coding | downstream | 19490 | 29220617 ~ 29220903 (+) |
| G339830 | LOC100846954 | other | upstream | 33327 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 284784 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 341168 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 1598767 | 27537262 ~ 27601564 (+) |
| LOC110522355 | plekhg1 | other | upstream | 2015353 | 27054628 ~ 27185449 (+) |
| G339928 | NA | other | downstream | 134242 | 29335369 ~ 29336939 (+) |
| G342538 | NA | other | downstream | 2180699 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 2216828 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 2250006 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 2584738 | 31785865 ~ 31786206 (+) |
