G340125 (LOC106608091)


Basic Information

Item Value
gene id G340125
gene name LOC106608091
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 29737993 ~ 29738401 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384974
tgtgcgtttgtggtTCTTGAGGTTTCCTGCGGTGGTGAACTTCTTGCCACAGTTCTTCTCCTTGCAGAAAAAAGGCTTGTCTCCGTTGTGAGTTCTCATGTGGACCTGAAGACGCTGCAGCACGTAGAAACTTTTCCCACAGCCCTCCGCCCCACACCGGAACATACGGTcgttcctgtgtgttttgaGGTGGTATTTGAGGTGAGCAGGCCAAGTGAAGGTTCTATAGCAGCCCTCAAAGGAGCAGCGGAGGTTCTGTTTAGAAGAAAGCGTACGATTGGTCCTCGTCGGCTGCTCTCTCTTCACACCCTCCAACGGGAAGCTGGGCAGGT

Function

NR:

description
zinc finger protein 410-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384974 True 332 lncRNA 0.53 2 29737993 29738401

Neighbor

gene id symbol gene type direction distance location
LOC110522461 LOC106608092 coding upstream 10792 29717778 ~ 29727201 (+)
LOC110522458 mmsa coding upstream 31192 29686032 ~ 29706801 (+)
LOC110522456 LOC106608096 coding upstream 96876 29633676 ~ 29641117 (+)
LOC110522454 LOC105017530 coding upstream 105622 29480176 ~ 29632371 (+)
LOC110522453 LOC106608073 coding upstream 259787 29463955 ~ 29478206 (+)
LOC110522463 LOC106608087 coding downstream 49167 29787568 ~ 29798140 (+)
LOC110522467 LOC106608085 coding downstream 99968 29838369 ~ 29842910 (+)
LOC110522470 prpf39 coding downstream 203775 29942176 ~ 29952127 (+)
LOC110522472 rs30 coding downstream 214060 29952461 ~ 29957558 (+)
LOC110522479 NA coding downstream 1057818 30796219 ~ 30797687 (+)
G340107 NA non-coding upstream 52387 29685352 ~ 29685606 (+)
G340106 LOC106608094 non-coding upstream 53780 29683820 ~ 29684213 (+)
G340081 NA non-coding upstream 90209 29647462 ~ 29647784 (+)
G340011 NA non-coding upstream 239459 29498147 ~ 29498534 (+)
LOC110522452 LOC106608075 non-coding upstream 276797 29422294 ~ 29461382 (+)
G340153 NA non-coding downstream 31405 29769806 ~ 29770443 (+)
G340155 NA non-coding downstream 59858 29798259 ~ 29803141 (+)
G340182 NA non-coding downstream 87870 29826271 ~ 29826549 (+)
G340193 NA non-coding downstream 112839 29851240 ~ 29851549 (+)
G340201 LOC107574485 non-coding downstream 120697 29859098 ~ 29890519 (+)
G339928 NA other upstream 401054 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 570997 29166518 ~ 29166996 (+)
G339693 NA other upstream 822454 28914599 ~ 28915539 (+)
G339660 NA other upstream 878838 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 2136437 27537262 ~ 27601564 (+)
G342538 NA other downstream 1643425 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 1679554 31417955 ~ 31422086 (+)
G342571 NA other downstream 1712732 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 2047464 31785865 ~ 31786206 (+)
G343958 NA other downstream 2956585 32694986 ~ 32704371 (+)

Expression


Co-expression Network