Gene
RNA
| Item | Value |
|---|---|
| gene id | G340153 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29769806 ~ 29770443 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| actin-related protein 10-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU385004 | True | 457 | lncRNA | 0.42 | 2 | 29769806 | 29770443 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522461 | LOC106608092 | coding | upstream | 42605 | 29717778 ~ 29727201 (+) |
| LOC110522458 | mmsa | coding | upstream | 63005 | 29686032 ~ 29706801 (+) |
| LOC110522456 | LOC106608096 | coding | upstream | 128689 | 29633676 ~ 29641117 (+) |
| LOC110522454 | LOC105017530 | coding | upstream | 137435 | 29480176 ~ 29632371 (+) |
| LOC110522453 | LOC106608073 | coding | upstream | 291600 | 29463955 ~ 29478206 (+) |
| LOC110522463 | LOC106608087 | coding | downstream | 17125 | 29787568 ~ 29798140 (+) |
| LOC110522467 | LOC106608085 | coding | downstream | 67926 | 29838369 ~ 29842910 (+) |
| LOC110522470 | prpf39 | coding | downstream | 171733 | 29942176 ~ 29952127 (+) |
| LOC110522472 | rs30 | coding | downstream | 182018 | 29952461 ~ 29957558 (+) |
| LOC110522479 | NA | coding | downstream | 1025776 | 30796219 ~ 30797687 (+) |
| G340125 | LOC106608091 | non-coding | upstream | 31405 | 29737993 ~ 29738401 (+) |
| G340107 | NA | non-coding | upstream | 84200 | 29685352 ~ 29685606 (+) |
| G340106 | LOC106608094 | non-coding | upstream | 85593 | 29683820 ~ 29684213 (+) |
| G340081 | NA | non-coding | upstream | 122022 | 29647462 ~ 29647784 (+) |
| G340011 | NA | non-coding | upstream | 271272 | 29498147 ~ 29498534 (+) |
| G340155 | NA | non-coding | downstream | 27816 | 29798259 ~ 29803141 (+) |
| G340182 | NA | non-coding | downstream | 55828 | 29826271 ~ 29826549 (+) |
| G340193 | NA | non-coding | downstream | 80797 | 29851240 ~ 29851549 (+) |
| G340201 | LOC107574485 | non-coding | downstream | 88655 | 29859098 ~ 29890519 (+) |
| G340219 | LOC106608084 | non-coding | downstream | 113360 | 29883803 ~ 29887768 (+) |
| G339928 | NA | other | upstream | 432867 | 29335369 ~ 29336939 (+) |
| G339830 | LOC100846954 | other | upstream | 602810 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 854267 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 910651 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 2168250 | 27537262 ~ 27601564 (+) |
| G342538 | NA | other | downstream | 1611383 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 1647512 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 1680690 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 2015422 | 31785865 ~ 31786206 (+) |
| G343958 | NA | other | downstream | 2924543 | 32694986 ~ 32704371 (+) |
