Gene
RNA
| Item | Value |
|---|---|
| gene id | G340182 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29826271 ~ 29826549 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106601083 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU385038 | True | 279 | lncRNA | 0.44 | 1 | 29826271 | 29826549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522463 | LOC106608087 | coding | upstream | 28131 | 29787568 ~ 29798140 (+) |
| LOC110522461 | LOC106608092 | coding | upstream | 99070 | 29717778 ~ 29727201 (+) |
| LOC110522458 | mmsa | coding | upstream | 119470 | 29686032 ~ 29706801 (+) |
| LOC110522456 | LOC106608096 | coding | upstream | 185154 | 29633676 ~ 29641117 (+) |
| LOC110522454 | LOC105017530 | coding | upstream | 193900 | 29480176 ~ 29632371 (+) |
| LOC110522467 | LOC106608085 | coding | downstream | 11820 | 29838369 ~ 29842910 (+) |
| LOC110522470 | prpf39 | coding | downstream | 115627 | 29942176 ~ 29952127 (+) |
| LOC110522472 | rs30 | coding | downstream | 125912 | 29952461 ~ 29957558 (+) |
| LOC110522479 | NA | coding | downstream | 969670 | 30796219 ~ 30797687 (+) |
| LOC110522477 | mgat2 | coding | downstream | 989867 | 30816416 ~ 30823059 (+) |
| G340155 | NA | non-coding | upstream | 23130 | 29798259 ~ 29803141 (+) |
| G340153 | NA | non-coding | upstream | 55828 | 29769806 ~ 29770443 (+) |
| G340125 | LOC106608091 | non-coding | upstream | 87870 | 29737993 ~ 29738401 (+) |
| G340107 | NA | non-coding | upstream | 140665 | 29685352 ~ 29685606 (+) |
| G340106 | LOC106608094 | non-coding | upstream | 142058 | 29683820 ~ 29684213 (+) |
| G340193 | NA | non-coding | downstream | 24691 | 29851240 ~ 29851549 (+) |
| G340201 | LOC107574485 | non-coding | downstream | 32549 | 29859098 ~ 29890519 (+) |
| G340219 | LOC106608084 | non-coding | downstream | 57254 | 29883803 ~ 29887768 (+) |
| G340225 | NA | non-coding | downstream | 67199 | 29893748 ~ 29894413 (+) |
| G340224 | NA | non-coding | downstream | 69243 | 29895792 ~ 29896176 (+) |
| G339928 | NA | other | upstream | 489332 | 29335369 ~ 29336939 (+) |
| G339830 | LOC100846954 | other | upstream | 659275 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 910732 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 967116 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 2224715 | 27537262 ~ 27601564 (+) |
| G342538 | NA | other | downstream | 1555277 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 1591406 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 1624584 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 1959316 | 31785865 ~ 31786206 (+) |
| G343958 | NA | other | downstream | 2868437 | 32694986 ~ 32704371 (+) |
