Gene
RNA
| Item | Value |
|---|---|
| gene id | G340240 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29929195 ~ 29929455 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU385105 | True | 261 | lncRNA | 0.35 | 1 | 29929195 | 29929455 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522467 | LOC106608085 | coding | upstream | 86285 | 29838369 ~ 29842910 (+) |
| LOC110522463 | LOC106608087 | coding | upstream | 131055 | 29787568 ~ 29798140 (+) |
| LOC110522461 | LOC106608092 | coding | upstream | 201994 | 29717778 ~ 29727201 (+) |
| LOC110522458 | mmsa | coding | upstream | 222394 | 29686032 ~ 29706801 (+) |
| LOC110522456 | LOC106608096 | coding | upstream | 288078 | 29633676 ~ 29641117 (+) |
| LOC110522470 | prpf39 | coding | downstream | 12721 | 29942176 ~ 29952127 (+) |
| LOC110522472 | rs30 | coding | downstream | 23006 | 29952461 ~ 29957558 (+) |
| LOC110522479 | NA | coding | downstream | 866764 | 30796219 ~ 30797687 (+) |
| LOC110522477 | mgat2 | coding | downstream | 886961 | 30816416 ~ 30823059 (+) |
| LOC110522488 | hs90a | coding | downstream | 1240196 | 31169651 ~ 31182712 (+) |
| G340238 | NA | non-coding | upstream | 1588 | 29927328 ~ 29927607 (+) |
| G340226 | NA | non-coding | upstream | 14963 | 29910638 ~ 29914232 (+) |
| G340227 | NA | non-coding | upstream | 21716 | 29903591 ~ 29907479 (+) |
| G340223 | NA | non-coding | upstream | 30751 | 29898125 ~ 29898444 (+) |
| G340224 | NA | non-coding | upstream | 33019 | 29895792 ~ 29896176 (+) |
| G340242 | NA | non-coding | downstream | 2370 | 29931825 ~ 29932303 (+) |
| G340243 | NA | non-coding | downstream | 3021 | 29932476 ~ 29932695 (+) |
| G340244 | NA | non-coding | downstream | 3703 | 29933158 ~ 29933395 (+) |
| G340245 | NA | non-coding | downstream | 4166 | 29933621 ~ 29933874 (+) |
| G340247 | NA | non-coding | downstream | 10373 | 29939828 ~ 29940116 (+) |
| G339928 | NA | other | upstream | 592256 | 29335369 ~ 29336939 (+) |
| G339830 | LOC100846954 | other | upstream | 762199 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 1013656 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 1070040 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 2327639 | 27537262 ~ 27601564 (+) |
| G342538 | NA | other | downstream | 1452371 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 1488500 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 1521678 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 1856410 | 31785865 ~ 31786206 (+) |
| G343958 | NA | other | downstream | 2765531 | 32694986 ~ 32704371 (+) |
