Gene
RNA
| Item | Value |
|---|---|
| gene id | G340260 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29975142 ~ 29975459 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU385125 | True | 318 | lncRNA | 0.37 | 1 | 29975142 | 29975459 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522472 | rs30 | coding | upstream | 17584 | 29952461 ~ 29957558 (+) |
| LOC110522470 | prpf39 | coding | upstream | 23015 | 29942176 ~ 29952127 (+) |
| LOC110522467 | LOC106608085 | coding | upstream | 132232 | 29838369 ~ 29842910 (+) |
| LOC110522463 | LOC106608087 | coding | upstream | 177002 | 29787568 ~ 29798140 (+) |
| LOC110522461 | LOC106608092 | coding | upstream | 247941 | 29717778 ~ 29727201 (+) |
| LOC110522479 | NA | coding | downstream | 820760 | 30796219 ~ 30797687 (+) |
| LOC110522477 | mgat2 | coding | downstream | 840957 | 30816416 ~ 30823059 (+) |
| LOC110522488 | hs90a | coding | downstream | 1194192 | 31169651 ~ 31182712 (+) |
| ppp2r5cb | LOC106608134 | coding | downstream | 1211767 | 31187226 ~ 31227364 (+) |
| slc25a29 | LOC106608124 | coding | downstream | 1416720 | 31392179 ~ 31401929 (+) |
| G340259 | NA | non-coding | upstream | 792 | 29973347 ~ 29974350 (+) |
| G340258 | NA | non-coding | upstream | 2756 | 29972162 ~ 29972386 (+) |
| G340247 | NA | non-coding | upstream | 35026 | 29939828 ~ 29940116 (+) |
| G340245 | NA | non-coding | upstream | 41268 | 29933621 ~ 29933874 (+) |
| G340244 | NA | non-coding | upstream | 41747 | 29933158 ~ 29933395 (+) |
| G340263 | NA | non-coding | downstream | 2616 | 29978075 ~ 29978330 (+) |
| G340267 | NA | non-coding | downstream | 12936 | 29988395 ~ 29989043 (+) |
| G340279 | LOC106608098 | non-coding | downstream | 30467 | 30005926 ~ 30006499 (+) |
| G340281 | NA | non-coding | downstream | 39061 | 30014520 ~ 30057088 (+) |
| G340326 | NA | non-coding | downstream | 117650 | 30093109 ~ 30152698 (+) |
| G339928 | NA | other | upstream | 638203 | 29335369 ~ 29336939 (+) |
| G339830 | LOC100846954 | other | upstream | 808146 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 1059603 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 1115987 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 2373586 | 27537262 ~ 27601564 (+) |
| G342538 | NA | other | downstream | 1406367 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 1442496 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 1475674 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 1810406 | 31785865 ~ 31786206 (+) |
| G343958 | NA | other | downstream | 2719527 | 32694986 ~ 32704371 (+) |
