G342707 (LOC106608120)


Basic Information

Item Value
gene id G342707
gene name LOC106608120
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 31785865 ~ 31786206 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU387844
CTCCATAGCGAGCGCGGCGGTCTGCTGGTCGTAGTGGTTGAGGTGGTTGGGCATGAAGGTGGAGTTATAGGGCAGCCCCTGACACAGACGCAGGGTGATAGGTTCACAGGTGAACATGCTGTGGCTCCCGGCTGCAGACTCCATGGGGATGGCCTCCACCACCACCGCTGGAGGCATCAGCATGGACAAACACAGCACCCACAGCAGCTCCATGGTCCCCGCAGGCTGGTGCACGGACAGGGACAGGTTCAGGGAAGAACCCAGGCTGcggacagggacagggttagggaagaAGCCAGGCTgcggacagggacagggtcagggaagAACCCAGGCTGCGGA

Function

NR:

description
PREDICTED: frizzled-3-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU387844 True 342 TUCP 0.63 1 31785865 31786206

Neighbor

gene id symbol gene type direction distance location
LOC110521078 LOC106608118 coding upstream 36262 31632668 ~ 31749603 (+)
LOC110521077 LOC106608119 coding upstream 162785 31607865 ~ 31623080 (+)
LOC110522497 sn25a coding upstream 280265 31470148 ~ 31505600 (+)
LOC118964493 NA coding upstream 326606 31456014 ~ 31459259 (+)
LOC110521075 NA coding upstream 330539 31422817 ~ 31455326 (+)
LOC118964494 NA coding downstream 17540 31803746 ~ 31808383 (+)
LOC110522501 LOC106571602 coding downstream 194389 31980595 ~ 32015870 (+)
tdrd6 tdrd6 coding downstream 241834 32028040 ~ 32052842 (+)
LOC110521080 ints9 coding downstream 286555 32072761 ~ 32082328 (+)
LOC118964510 NA coding downstream 305954 32092160 ~ 32092446 (+)
G342703 NA non-coding upstream 8556 31777080 ~ 31777309 (+)
G342701 NA non-coding upstream 17034 31768528 ~ 31768831 (+)
G342699 LOC106608120 non-coding upstream 18089 31767311 ~ 31767776 (+)
G342698 LOC106608120 non-coding upstream 19200 31766307 ~ 31766665 (+)
G342697 NA non-coding upstream 19821 31765794 ~ 31766044 (+)
G342937 NA non-coding downstream 18818 31805024 ~ 31805543 (+)
G342938 NA non-coding downstream 19361 31805567 ~ 31805855 (+)
G342943 NA non-coding downstream 23055 31809261 ~ 31811234 (+)
G342948 NA non-coding downstream 30971 31817177 ~ 31820871 (+)
G343028 NA non-coding downstream 89712 31875918 ~ 31876121 (+)
G342571 NA other upstream 334389 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 366609 31417955 ~ 31422086 (+)
G342538 NA other upstream 403116 31381826 ~ 31382749 (+)
G339928 NA other upstream 2448926 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 2618869 29166518 ~ 29166996 (+)
G343958 NA other downstream 908780 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1685846 33469529 ~ 33489784 (+)
G344647 NA other downstream 1765921 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1798772 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 2604767 34390869 ~ 34394175 (+)

Expression


Co-expression Network