G343038


Basic Information

Item Value
gene id G343038
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 31892281 ~ 31892578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU388227
tatatatacagtgttgtagtgatgtacaaatggttaaagtacaaaagggaaaataaataagcataaatatgggttgtatttccaatggtgtttgttcttcactggttgaccttttcttgtggcaacaggtcacaaatcttgctgctgtgatggcacactgtagtATTTCACCCagcagatatgggagtttatcaaaatcgggtttgtttttgaattctttgtgaatctgtgtaatctgagggaaatatgtgtctctaatatggtcatacattgggcaggaggttaggaagtgcagctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388227 True 298 lncRNA 0.38 1 31892281 31892578

Neighbor

gene id symbol gene type direction distance location
LOC118964494 NA coding upstream 83898 31803746 ~ 31808383 (+)
LOC110521078 LOC106608118 coding upstream 142678 31632668 ~ 31749603 (+)
LOC110521077 LOC106608119 coding upstream 269201 31607865 ~ 31623080 (+)
LOC110522497 sn25a coding upstream 386681 31470148 ~ 31505600 (+)
LOC118964493 NA coding upstream 433022 31456014 ~ 31459259 (+)
LOC110522501 LOC106571602 coding downstream 88017 31980595 ~ 32015870 (+)
tdrd6 tdrd6 coding downstream 135462 32028040 ~ 32052842 (+)
LOC110521080 ints9 coding downstream 180183 32072761 ~ 32082328 (+)
LOC118964510 NA coding downstream 199582 32092160 ~ 32092446 (+)
antiprot1 antiprot1 coding downstream 228682 32121260 ~ 32123842 (+)
G343030 NA non-coding upstream 13768 31878276 ~ 31878513 (+)
G343029 NA non-coding upstream 15725 31876323 ~ 31876556 (+)
G343028 NA non-coding upstream 16160 31875918 ~ 31876121 (+)
G342948 NA non-coding upstream 71410 31817177 ~ 31820871 (+)
G342943 NA non-coding upstream 81047 31809261 ~ 31811234 (+)
G343050 NA non-coding downstream 5357 31897935 ~ 31898217 (+)
G343051 NA non-coding downstream 8003 31900581 ~ 31901045 (+)
G343068 NA non-coding downstream 28975 31921553 ~ 31922094 (+)
G343153 NA non-coding downstream 133639 32026217 ~ 32026526 (+)
G343175 NA non-coding downstream 142545 32035123 ~ 32035333 (+)
G342707 LOC106608120 other upstream 106075 31785865 ~ 31786206 (+)
G342571 NA other upstream 440805 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 473025 31417955 ~ 31422086 (+)
G342538 NA other upstream 509532 31381826 ~ 31382749 (+)
G339928 NA other upstream 2555342 29335369 ~ 29336939 (+)
G343958 NA other downstream 802408 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1579474 33469529 ~ 33489784 (+)
G344647 NA other downstream 1659549 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1692400 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 2498395 34390869 ~ 34394175 (+)

Expression


Co-expression Network