G343153


Basic Information

Item Value
gene id G343153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32026217 ~ 32026526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU388350
CATTTTtataaatgctaaaaatccaatcttactgaaacgTATTTCACTTTTTGGCCTATCCCTCTTTACTGGTATATCTttactactctcaccactcctcccccttaacccatcttcctctacattcttcactgcctcagcatatgacatcttctgctctactctaaccctggaaacctcaacctgcctctctcgcacagGAAATGTCTGATTCCCAGCTCaatgggcacccctacaattaacacattccactactttcctcaatactacacattcctttgtctcatgcccttctgcacatttCTCACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388350 True 310 lncRNA 0.43 1 32026217 32026526

Neighbor

gene id symbol gene type direction distance location
LOC110522501 LOC106571602 coding upstream 10347 31980595 ~ 32015870 (+)
LOC118964494 NA coding upstream 217834 31803746 ~ 31808383 (+)
LOC110521078 LOC106608118 coding upstream 276614 31632668 ~ 31749603 (+)
LOC110521077 LOC106608119 coding upstream 403137 31607865 ~ 31623080 (+)
LOC110522497 sn25a coding upstream 520617 31470148 ~ 31505600 (+)
tdrd6 tdrd6 coding downstream 1514 32028040 ~ 32052842 (+)
LOC110521080 ints9 coding downstream 46235 32072761 ~ 32082328 (+)
LOC118964510 NA coding downstream 65634 32092160 ~ 32092446 (+)
antiprot1 antiprot1 coding downstream 94734 32121260 ~ 32123842 (+)
LOC110522505 LOC106608111 coding downstream 508055 32534581 ~ 32541487 (+)
G343068 NA non-coding upstream 104123 31921553 ~ 31922094 (+)
G343051 NA non-coding upstream 125172 31900581 ~ 31901045 (+)
G343050 NA non-coding upstream 128000 31897935 ~ 31898217 (+)
G343038 NA non-coding upstream 133639 31892281 ~ 31892578 (+)
G343030 NA non-coding upstream 147704 31878276 ~ 31878513 (+)
G343175 NA non-coding downstream 8597 32035123 ~ 32035333 (+)
G343242 NA non-coding downstream 154758 32181284 ~ 32182676 (+)
G343394 NA non-coding downstream 177637 32204163 ~ 32204376 (+)
G343396 NA non-coding downstream 178898 32205424 ~ 32206262 (+)
G343404 NA non-coding downstream 188615 32215141 ~ 32215402 (+)
G342707 LOC106608120 other upstream 240011 31785865 ~ 31786206 (+)
G342571 NA other upstream 574741 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 606961 31417955 ~ 31422086 (+)
G342538 NA other upstream 643468 31381826 ~ 31382749 (+)
G339928 NA other upstream 2689278 29335369 ~ 29336939 (+)
G343958 NA other downstream 668460 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1445526 33469529 ~ 33489784 (+)
G344647 NA other downstream 1525601 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1558452 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 2364447 34390869 ~ 34394175 (+)

Expression


Co-expression Network