G343441


Basic Information

Item Value
gene id G343441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32238456 ~ 32238681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU388661
TATGTATTGATAATGAGTTATGTTTGAAATACACATCCATACTTTACACACTtggatacctgtgtgtgtgtgtgtttactacaCGTACGACAAAACTTTATTGCAAACTGCTATGCCCTGCAAACAGAAAAAGCAACAGCCACAAGTGTTTTTCATTTATACAATCAGTGCCTAGCTGGTGCTTGTGTGCTTATTCAAATGATGgtttgtgtgtactgtactgtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388661 True 226 lncRNA 0.37 1 32238456 32238681

Neighbor

gene id symbol gene type direction distance location
antiprot1 antiprot1 coding upstream 114614 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 146010 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 156128 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 185614 32028040 ~ 32052842 (+)
LOC110522501 LOC106571602 coding upstream 222586 31980595 ~ 32015870 (+)
LOC110522505 LOC106608111 coding downstream 295900 32534581 ~ 32541487 (+)
LOC110520986 NA coding downstream 427607 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 605253 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 615376 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 672029 32910710 ~ 32912647 (+)
G343435 NA non-coding upstream 4076 32234092 ~ 32234380 (+)
G343423 NA non-coding upstream 9458 32228627 ~ 32228998 (+)
G343404 NA non-coding upstream 23054 32215141 ~ 32215402 (+)
G343396 NA non-coding upstream 32194 32205424 ~ 32206262 (+)
G343394 NA non-coding upstream 34080 32204163 ~ 32204376 (+)
G343445 NA non-coding downstream 4553 32243234 ~ 32243566 (+)
G343458 NA non-coding downstream 11712 32250393 ~ 32250644 (+)
G343506 NA non-coding downstream 53496 32292177 ~ 32292420 (+)
G343513 NA non-coding downstream 58111 32296792 ~ 32297014 (+)
G343529 NA non-coding downstream 68474 32307155 ~ 32307386 (+)
G342707 LOC106608120 other upstream 452250 31785865 ~ 31786206 (+)
G342571 NA other upstream 786980 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 819200 31417955 ~ 31422086 (+)
G342538 NA other upstream 855707 31381826 ~ 31382749 (+)
G339928 NA other upstream 2901517 29335369 ~ 29336939 (+)
G343958 NA other downstream 456305 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1233371 33469529 ~ 33489784 (+)
G344647 NA other downstream 1313446 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1346297 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 2152292 34390869 ~ 34394175 (+)

Expression


Co-expression Network