G343529


Basic Information

Item Value
gene id G343529
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32307155 ~ 32307386 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU388756
cgtaaactcaccccattccgtacaaatgtgcgcaaccgcaacattcaaacgaggctacaaagaaaactaatgggactgtgttgacttcaacatcgggggtgtgaactaggtttctattcaagcgttgatcgacatggtaatggctctatagtattggagaaaagttgaaaaaactgaccctccgttacatgTTGACGtttcatgtcgtaacgtacagcacgcataaagcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388756 True 232 lncRNA 0.44 1 32307155 32307386

Neighbor

gene id symbol gene type direction distance location
antiprot1 antiprot1 coding upstream 183313 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 214709 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 224827 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 254313 32028040 ~ 32052842 (+)
LOC110522501 LOC106571602 coding upstream 291285 31980595 ~ 32015870 (+)
LOC110522505 LOC106608111 coding downstream 227195 32534581 ~ 32541487 (+)
LOC110520986 NA coding downstream 358902 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 536548 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 546671 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 603324 32910710 ~ 32912647 (+)
G343513 NA non-coding upstream 10141 32296792 ~ 32297014 (+)
G343506 NA non-coding upstream 14735 32292177 ~ 32292420 (+)
G343458 NA non-coding upstream 56511 32250393 ~ 32250644 (+)
G343445 NA non-coding upstream 63589 32243234 ~ 32243566 (+)
G343441 NA non-coding upstream 68474 32238456 ~ 32238681 (+)
G343531 NA non-coding downstream 1238 32308624 ~ 32308879 (+)
G343679 NA non-coding downstream 121032 32428418 ~ 32428653 (+)
G343734 NA non-coding downstream 175761 32483147 ~ 32483389 (+)
G343776 NA non-coding downstream 217329 32524715 ~ 32524923 (+)
G343813 NA non-coding downstream 245921 32553307 ~ 32553507 (+)
G342707 LOC106608120 other upstream 520949 31785865 ~ 31786206 (+)
G342571 NA other upstream 855679 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 887899 31417955 ~ 31422086 (+)
G342538 NA other upstream 924406 31381826 ~ 31382749 (+)
G339928 NA other upstream 2970216 29335369 ~ 29336939 (+)
G343958 NA other downstream 387600 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1164666 33469529 ~ 33489784 (+)
G344647 NA other downstream 1244741 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1277592 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 2083587 34390869 ~ 34394175 (+)

Expression


Co-expression Network