G343531


Basic Information

Item Value
gene id G343531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32308624 ~ 32308879 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU388758
TCTTTAAATTGTAGACCAGCGCCCACGTTGTTTCGTCTCTCAAATGCAATTTGACTCGATTCATATTAATCAGCGTCTACTATCCACTGAACAAAAGAGGAAAGTTTTTGACGTTGTGTGAATTGAAGGTTTGGGTATCTAGACAACTCTTTTCACATGAGGTTATGAAAAGTGCAGTATGTAGCATCCTGTTCTATTCAGTGAGTGCATTTAGGGGGCATTCGGTTTATTTGATGTGGTGAAGCTCTCACAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388758 True 256 lncRNA 0.40 1 32308624 32308879

Neighbor

gene id symbol gene type direction distance location
antiprot1 antiprot1 coding upstream 184782 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 216178 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 226296 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 255782 32028040 ~ 32052842 (+)
LOC110522501 LOC106571602 coding upstream 292754 31980595 ~ 32015870 (+)
LOC110522505 LOC106608111 coding downstream 225702 32534581 ~ 32541487 (+)
LOC110520986 NA coding downstream 357409 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 535055 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 545178 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 601831 32910710 ~ 32912647 (+)
G343529 NA non-coding upstream 1238 32307155 ~ 32307386 (+)
G343513 NA non-coding upstream 11610 32296792 ~ 32297014 (+)
G343506 NA non-coding upstream 16204 32292177 ~ 32292420 (+)
G343458 NA non-coding upstream 57980 32250393 ~ 32250644 (+)
G343445 NA non-coding upstream 65058 32243234 ~ 32243566 (+)
G343679 NA non-coding downstream 119539 32428418 ~ 32428653 (+)
G343734 NA non-coding downstream 174268 32483147 ~ 32483389 (+)
G343776 NA non-coding downstream 215836 32524715 ~ 32524923 (+)
G343813 NA non-coding downstream 244428 32553307 ~ 32553507 (+)
G343845 NA non-coding downstream 265157 32574036 ~ 32574311 (+)
G342707 LOC106608120 other upstream 522418 31785865 ~ 31786206 (+)
G342571 NA other upstream 857148 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 889368 31417955 ~ 31422086 (+)
G342538 NA other upstream 925875 31381826 ~ 31382749 (+)
G339928 NA other upstream 2971685 29335369 ~ 29336939 (+)
G343958 NA other downstream 386107 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1163173 33469529 ~ 33489784 (+)
G344647 NA other downstream 1243248 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1276099 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 2082094 34390869 ~ 34394175 (+)

Expression


Co-expression Network