G343679


Basic Information

Item Value
gene id G343679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32428418 ~ 32428653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU388909
accaacaagtaatctaactaacaattccaaaactactgtcttatacacagtgtaaggggataaagaatatatacataaggatatatgaatgagtgatggtacagagcagcataggcaagatacagtagatggtatcgagtacagtatatacatatgagatgagtatgtaaacaaagtggtatagttaaagtggctagtgatacatgtattacataaggattcagtcgatgatatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388909 True 236 lncRNA 0.33 1 32428418 32428653

Neighbor

gene id symbol gene type direction distance location
antiprot1 antiprot1 coding upstream 304576 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 335972 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 346090 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 375576 32028040 ~ 32052842 (+)
LOC110522501 LOC106571602 coding upstream 412548 31980595 ~ 32015870 (+)
LOC110522505 LOC106608111 coding downstream 105928 32534581 ~ 32541487 (+)
LOC110520986 NA coding downstream 237635 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 415281 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 425404 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 482057 32910710 ~ 32912647 (+)
G343531 NA non-coding upstream 119539 32308624 ~ 32308879 (+)
G343529 NA non-coding upstream 121032 32307155 ~ 32307386 (+)
G343513 NA non-coding upstream 131404 32296792 ~ 32297014 (+)
G343506 NA non-coding upstream 135998 32292177 ~ 32292420 (+)
G343458 NA non-coding upstream 177774 32250393 ~ 32250644 (+)
G343734 NA non-coding downstream 54494 32483147 ~ 32483389 (+)
G343776 NA non-coding downstream 96062 32524715 ~ 32524923 (+)
G343813 NA non-coding downstream 124654 32553307 ~ 32553507 (+)
G343845 NA non-coding downstream 145383 32574036 ~ 32574311 (+)
G343861 NA non-coding downstream 158737 32587390 ~ 32587595 (+)
G342707 LOC106608120 other upstream 642212 31785865 ~ 31786206 (+)
G342571 NA other upstream 976942 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1009162 31417955 ~ 31422086 (+)
G342538 NA other upstream 1045669 31381826 ~ 31382749 (+)
G339928 NA other upstream 3091479 29335369 ~ 29336939 (+)
G343958 NA other downstream 266333 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1043399 33469529 ~ 33489784 (+)
G344647 NA other downstream 1123474 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1156325 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1962320 34390869 ~ 34394175 (+)

Expression


Co-expression Network