G343813


Basic Information

Item Value
gene id G343813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32553307 ~ 32553507 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389058
AATATTTCCTCATCACTGTTTGTTTTAACTCTGTAAGCCGTATTTGTAGAGTTTCATATGAATGTTATAGTATTGATTCAGATAACATGTTAATGTGGCTTCAAACACGAGGCTTAAAAGAATGCCCTGACGTCTTGGGACTGTATACTGCTAACTCAAAAATACATGGGTCAAATGTTCCACTGTGCATCTACACAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389058 True 201 lncRNA 0.36 1 32553307 32553507

Neighbor

gene id symbol gene type direction distance location
LOC110522505 LOC106608111 coding upstream 11820 32534581 ~ 32541487 (+)
antiprot1 antiprot1 coding upstream 429465 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 460861 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 470979 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 500465 32028040 ~ 32052842 (+)
LOC110520986 NA coding downstream 112781 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 290427 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 300550 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 357203 32910710 ~ 32912647 (+)
LOC110521081 LOC106571614 coding downstream 411700 32965207 ~ 33118062 (+)
G343776 NA non-coding upstream 28384 32524715 ~ 32524923 (+)
G343734 NA non-coding upstream 69918 32483147 ~ 32483389 (+)
G343679 NA non-coding upstream 124654 32428418 ~ 32428653 (+)
G343531 NA non-coding upstream 244428 32308624 ~ 32308879 (+)
G343529 NA non-coding upstream 245921 32307155 ~ 32307386 (+)
G343845 NA non-coding downstream 20529 32574036 ~ 32574311 (+)
G343861 NA non-coding downstream 33883 32587390 ~ 32587595 (+)
G343879 NA non-coding downstream 45673 32599180 ~ 32599995 (+)
G343910 NA non-coding downstream 63747 32617254 ~ 32617490 (+)
G343919 NA non-coding downstream 67897 32621404 ~ 32621661 (+)
G342707 LOC106608120 other upstream 767101 31785865 ~ 31786206 (+)
G342571 NA other upstream 1101831 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1134051 31417955 ~ 31422086 (+)
G342538 NA other upstream 1170558 31381826 ~ 31382749 (+)
G339928 NA other upstream 3216368 29335369 ~ 29336939 (+)
G343958 NA other downstream 141479 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 918545 33469529 ~ 33489784 (+)
G344647 NA other downstream 998620 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1031471 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1837466 34390869 ~ 34394175 (+)

Expression


Co-expression Network