G343910


Basic Information

Item Value
gene id G343910
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32617254 ~ 32617490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389156
ggggaaaagggtacctaagtatggttctcaatcagagacaacgatagacagctgtccctgattgagaaccataccaggccaagacatagaaatacaaaacatagaaaaaaggacatagaatgcccaccctagtcacaacctggcctaaccaaaatagagaaaaaaaagcctctctatggccagggcgtgacaacctcagtatacagtgccttgcgaaagtattcggcccccttgaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389156 True 237 lncRNA 0.46 1 32617254 32617490

Neighbor

gene id symbol gene type direction distance location
LOC110522505 LOC106608111 coding upstream 75767 32534581 ~ 32541487 (+)
antiprot1 antiprot1 coding upstream 493412 32121260 ~ 32123842 (+)
LOC118964510 NA coding upstream 524808 32092160 ~ 32092446 (+)
LOC110521080 ints9 coding upstream 534926 32072761 ~ 32082328 (+)
tdrd6 tdrd6 coding upstream 564412 32028040 ~ 32052842 (+)
LOC110520986 NA coding downstream 48798 32666288 ~ 32699603 (+)
rnh1 rnh1 coding downstream 226444 32843934 ~ 32850818 (+)
LOC110520987 NA coding downstream 236567 32854057 ~ 32865131 (+)
LOC118964496 NA coding downstream 293220 32910710 ~ 32912647 (+)
LOC110521081 LOC106571614 coding downstream 347717 32965207 ~ 33118062 (+)
G343879 NA non-coding upstream 17259 32599180 ~ 32599995 (+)
G343861 NA non-coding upstream 29659 32587390 ~ 32587595 (+)
G343845 NA non-coding upstream 42943 32574036 ~ 32574311 (+)
G343813 NA non-coding upstream 63747 32553307 ~ 32553507 (+)
G343776 NA non-coding upstream 92331 32524715 ~ 32524923 (+)
G343919 NA non-coding downstream 3914 32621404 ~ 32621661 (+)
G344041 NA non-coding downstream 127501 32744991 ~ 32745199 (+)
G344042 NA non-coding downstream 127887 32745377 ~ 32745749 (+)
G344121 NA non-coding downstream 222622 32840112 ~ 32843737 (+)
G344224 NA non-coding downstream 284627 32902117 ~ 32902390 (+)
G342707 LOC106608120 other upstream 831048 31785865 ~ 31786206 (+)
G342571 NA other upstream 1165778 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1197998 31417955 ~ 31422086 (+)
G342538 NA other upstream 1234505 31381826 ~ 31382749 (+)
G339928 NA other upstream 3280315 29335369 ~ 29336939 (+)
G343958 NA other downstream 77496 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 854562 33469529 ~ 33489784 (+)
G344647 NA other downstream 934637 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 967488 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1773483 34390869 ~ 34394175 (+)

Expression


Co-expression Network