G344442


Basic Information

Item Value
gene id G344442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33185828 ~ 33188665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389801
CCATGACAGAAACCCTATTTTCTGCTGTCCAGAGATGGACTGGAAATTCCTCATTAATATGTATTTTCTCTGCCTCTTCAATAAACAACTGCTAAGCAAAAATTAACACTGCAAATAGACTATTTGCAAAGATGGTGTTTTCGCAAGTCAATAGCAACCATCTTTAATTCCAGATGCTATGGGCACCATTTAGTAAATATGTTAAAaagtagctgtgtgtgtaggaCAGGGTAAATAACAACCGTTTCAGAGTAAAAAACAGCACCATTTACTAGTAACTAGATAGTGTTAAAGTGTCATTTGCACCTGTCTGTCCCACACTACATCTGTACTTGATTGTTGTGTGCCAGATGGGATGATATGGCTGTGATGTGGTCCCTAATAGGTAGGACTGTTAGGCCACTGTTCTCTACACCCGATAGATACTCACTTTTTCACACCATCTACTATGAGAATATCGAGTTCAATCTAATATATATGTGGGTGTGATAGATTACATGATTTATCATTACAATCAATCGTACTTGACACCAGAGGCTTGAATGCcagaatgtcattatggggctaAACACACAACTCAAAGTGGACTATAGAATAACCTAATAGTCCTATTCAGTAGAAAATATCCCACATCTGTCCTTGCAAATAAACTGCAACAATAGCAAGTGAGCATCATGAACTACATTTCCCTTGGAAATACAAACATGAATAGTACATATAAGGTGCAAAAATGCATTGTATCATAtagtacattttttttcttccagaATTAGAAACATTTGTTTCCTTTAAATGATTTACAATAGTGTTGCAATGGAAACATGTATCAGAGGAATAAATGTACTGTACCACCCATATCATAAGCATGTTTCAGCCTTACATCAATGCCATTATCAGAAGTGAAAATGCATCAATGCAGCCCTAATGTAATACTGCATGTATTTTTCACATCCCATTTCTCAGCAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTTGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTTGCTGAGGCGGCTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTAGCTGCAGTAGCTAGCCTGGTAACATTAGTCAGTGGCTGCAGTAGCTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGTTAGCCTGGTAACATTAGTCAGTGGCTGAGGCAGCTAGCCTGGTAACATTAGTCAGTAGCTGCAGTAGCTAGCCTGGTAACATTAGTCGGTGGCTGAGGCAGCTAGCCTGGTAAAAAGTGGTCTGACGTTAGTCAGTGGCTGCAGTAGCTAGCCTGGTAACATTTGTCAGTGGCTGCAGTAGCTAGCCTGGTAACATTTGTCAGTGGCTGCAGTAGCTAGCCTGGTATAAAGTGGTGTGATGTTAGTCAGTGGCTGCAGATACTAGCCTGGTATAAAGTGGTGTGATGTTAGTCAGTGGCTGCAGATAGTCTGGTAGTGGGGTGACGTTAGTCAGGGGCTGCAGTAGCTAGCATGGTAAAAAGTTGTGTGAGTACGTCCCTAGAATAACAAAATAATTACTATACCCACCCAGCATGCTGTGCGAGTGCAACCATTTCAGATATGATGACTTCTCTGTCtttaccatagaaatagaatagaCTTAGATTAGAATTATATGTCTATGGTGTTTACCTGCAAGACTGAGGTATTTCAATAGCAGGTGTTGATCAATCACATgatataccccccccccactTATGCTGTCAACCCACCAACATGGGGAGAGATTTTCAGACATCTGTCTTGACAGTGAGTCATCACCACCTCTGTGCTACCACTGGGATGCAGTAGTCTCCACACAGGGTGTTTTAGCCCAAGACCACTGTTGCTGGTGAGATTCTCCATAAAAAAGTTGCACTTTGTGATTCCCTTTGAACACTGTGGAAAAATACTGACATCCCCCTTAACTTTACCCAGAGGCTTATAATAATACATGATGGCAATGCAAAAGCTCTTAGGGGGAAGTACatttccaacaacaacattggttACAGTATAGAAAATAATTTATTTGCTTGTATTTACCCAAATATAATTGTGATGGTGGATCAGTTCGGTTAAAGGGGAGGGTGTACTAGCAGCTCATTGTAGTGGAGTGGGGAATATTCCCTCCATCTTAAAGGGGAGAGGACACCAGAAGAATGGCAACAGGTGGAGAAAAAAACGTGTGGAGTGAGAGACATTTGCACAGataagaaggagagaggaaggggtctGGGTTACACCCACTGGCTGGGGCTGAGGTATGGGGGCGGATATGGGCAAAACAGGGGTAGGGGGGGTAAATCCTCGAACCTCAAAGACGTGTCTGGGCCTCGGGGATGTAGATCTCGATGCTGTCCGCCCGCTCCGTGGCTGAGTTCTGTCTGAAGGAAGCCGCCCGCTTGGCAGCCAGAAGACGGCGCCGGGCCTCCTGACGCTGGCGGTCCTGCAGGTCCAGAGAGCGCTCCCGCACCACGCCACCACGCCCCTTCGGAGGTCTCTTTG

Function

NR:

description
PREDICTED: disks large-associated protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389801 True 2731 lncRNA 0.45 3 33185828 33188665

Neighbor

gene id symbol gene type direction distance location
LOC110522508 ccr6 coding upstream 40659 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 48318 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 67766 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 273181 32910710 ~ 32912647 (+)
LOC110520987 NA coding upstream 320697 32854057 ~ 32865131 (+)
LOC110522510 LOC106608180 coding downstream 170291 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 201207 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 215744 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 220448 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 280864 33469529 ~ 33489784 (+)
G344441 NA non-coding upstream 211 33181449 ~ 33185617 (+)
G344433 NA non-coding upstream 13558 33171425 ~ 33172270 (+)
G344426 LOC105024815 non-coding upstream 30417 33151481 ~ 33155411 (+)
G344263 NA non-coding upstream 73660 33107793 ~ 33112168 (+)
G344264 NA non-coding upstream 73991 33106695 ~ 33111837 (+)
G344443 LOC106608148 non-coding downstream 1937 33190602 ~ 33191272 (+)
G344445 LOC106608148 non-coding downstream 4347 33193012 ~ 33193430 (+)
G344449 NA non-coding downstream 9644 33198309 ~ 33199239 (+)
G344450 NA non-coding downstream 13232 33201897 ~ 33202406 (+)
G344451 NA non-coding downstream 14010 33202675 ~ 33202881 (+)
G343958 NA other upstream 481457 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1399622 31785865 ~ 31786206 (+)
G342571 NA other upstream 1734352 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1766572 31417955 ~ 31422086 (+)
G342538 NA other upstream 1803079 31381826 ~ 31382749 (+)
G344647 NA other downstream 363462 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 396313 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1202308 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1348336 34536950 ~ 34541410 (+)

Expression


Co-expression Network