G344450


Basic Information

Item Value
gene id G344450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33201897 ~ 33202406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389809
CCAGAACCATTTTTAACTCCTACCCTCCAAGTAACCAGAACCATGTTTAACTCCTACCCTCCAAGTAACCAGAACCATGTTTAACTCCTACCCTCCAAGTAACCAGAACCATGTTTAACTCCTACTCTCAGTCACCAGAACCATGTTTAACTCCTACCCTCCAAGTAACCAGAACCATGTTTAACTCCTACCCTCCAAGTAACCAGAACCATGTTTAACCTCACGCATTGGACAGATCCTCAttatcacaccaccaccacctaactAATGACTAGCAGGCAGCTCAGGCTTAGTACATATCCTCAgtaccatagagatcctattaagtTACTAGAGGGGCTATGACATAAACCCTTCAAGTTACAGAATTGGGTCAAGATGGCAGCCATATTgatcagggagaaatccaaaccagtctaattgcAATGAATGGTAGTAGAAGCATACTCCTGATTTGACATATGCAGAAATTGTAGAATTGTTGTCAAATATTTATACAGATGTATACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389809 True 510 lncRNA 0.41 1 33201897 33202406

Neighbor

gene id symbol gene type direction distance location
LOC110522508 ccr6 coding upstream 56728 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 64387 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 83835 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 289250 32910710 ~ 32912647 (+)
LOC110520987 NA coding upstream 336766 32854057 ~ 32865131 (+)
LOC110522510 LOC106608180 coding downstream 156550 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 187466 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 202003 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 206707 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 267123 33469529 ~ 33489784 (+)
G344449 NA non-coding upstream 2658 33198309 ~ 33199239 (+)
G344445 LOC106608148 non-coding upstream 8467 33193012 ~ 33193430 (+)
G344443 LOC106608148 non-coding upstream 10625 33190602 ~ 33191272 (+)
G344442 NA non-coding upstream 13232 33185828 ~ 33188665 (+)
G344441 NA non-coding upstream 16280 33181449 ~ 33185617 (+)
G344451 NA non-coding downstream 269 33202675 ~ 33202881 (+)
G344455 NA non-coding downstream 4395 33206801 ~ 33207077 (+)
G344456 NA non-coding downstream 4837 33207243 ~ 33207444 (+)
G344458 NA non-coding downstream 7090 33209496 ~ 33209712 (+)
G344461 NA non-coding downstream 10783 33213189 ~ 33213899 (+)
G343958 NA other upstream 497526 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1415691 31785865 ~ 31786206 (+)
G342571 NA other upstream 1750421 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1782641 31417955 ~ 31422086 (+)
G342538 NA other upstream 1819148 31381826 ~ 31382749 (+)
G344647 NA other downstream 349721 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 382572 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1188567 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1334595 34536950 ~ 34541410 (+)

Expression


Co-expression Network