G344455


Basic Information

Item Value
gene id G344455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33206801 ~ 33207077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389814
ctgtaacgattctcctcttgtgaagtagaggcggaccaaagcgcagcgtggtggttgttcattgtaatttattgacgacactatacatgaacaaactaacgaaaaaacaagaaacgtgagaactcaaaacagccctgtctggtgcaaacacaaaaacaggaacaatcacccacaaacaaacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaaacatagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389814 True 277 lncRNA 0.42 1 33206801 33207077

Neighbor

gene id symbol gene type direction distance location
LOC110522508 ccr6 coding upstream 61632 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 69291 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 88739 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 294154 32910710 ~ 32912647 (+)
LOC110520987 NA coding upstream 341670 32854057 ~ 32865131 (+)
LOC110522510 LOC106608180 coding downstream 151879 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 182795 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 197332 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 202036 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 262452 33469529 ~ 33489784 (+)
G344451 NA non-coding upstream 3920 33202675 ~ 33202881 (+)
G344450 NA non-coding upstream 4395 33201897 ~ 33202406 (+)
G344449 NA non-coding upstream 7562 33198309 ~ 33199239 (+)
G344445 LOC106608148 non-coding upstream 13371 33193012 ~ 33193430 (+)
G344443 LOC106608148 non-coding upstream 15529 33190602 ~ 33191272 (+)
G344456 NA non-coding downstream 166 33207243 ~ 33207444 (+)
G344458 NA non-coding downstream 2419 33209496 ~ 33209712 (+)
G344461 NA non-coding downstream 6112 33213189 ~ 33213899 (+)
G344460 NA non-coding downstream 8078 33215155 ~ 33215644 (+)
G344465 NA non-coding downstream 17033 33224110 ~ 33224318 (+)
G343958 NA other upstream 502430 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1420595 31785865 ~ 31786206 (+)
G342571 NA other upstream 1755325 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1787545 31417955 ~ 31422086 (+)
G342538 NA other upstream 1824052 31381826 ~ 31382749 (+)
G344647 NA other downstream 345050 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 377901 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1183896 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1329924 34536950 ~ 34541410 (+)

Expression


Co-expression Network